Pairwise Alignments

Query, 315 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Vibrio cholerae E7946 ATCC 55056

Subject, 219 a.a., pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32) (NCBI) from Escherichia coli BW25113

 Score =  120 bits (301), Expect = 3e-32
 Identities = 78/211 (36%), Positives = 119/211 (56%), Gaps = 13/211 (6%)

Query: 97  IVYEDDHLLILNKPSGT-AVHGGSGLHFGAIEA-LRALRPQARFLELVHRIDRDTSGILL 154
           I+Y+DDH++++NKPSG  +V G    H  ++   ++   PQA   E VHR+D  TSG+++
Sbjct: 16  ILYQDDHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDYPQA---ESVHRLDMATSGVIV 72

Query: 155 VAKKRSALRHLQAQFREKTVQKYYYALVMGHWDAECKVVNAPLLKNEVNSIVR--VNPNG 212
           VA  ++A R L+ QFRE+  +K Y A V GH      +V+ PL+ +  N   +      G
Sbjct: 73  VALTKAAERELKRQFREREPKKQYVARVWGHPSPAEGLVDLPLICDWPNRPKQKVCYETG 132

Query: 213 KPSETRFRILEKFAEATL-VQASPVTGRTHQIRVHTQYMGHPIAWDDRYGDRRFDAYTAQ 271
           KP++T + ++E  A+ T  V   P+TGR+HQ+RVH   +GHPI      GDR + +  A+
Sbjct: 133 KPAQTEYEVVEYAADNTARVVLKPITGRSHQLRVHMLALGHPI-----LGDRFYASPEAR 187

Query: 272 FGIERLFLHAANIQFVHPASEKKLEIHAPLE 302
               RL LHA  +   HPA    +   AP +
Sbjct: 188 AMAPRLLLHAEMLTITHPAYGNSMTFKAPAD 218