Pairwise Alignments

Query, 315 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Vibrio cholerae E7946 ATCC 55056

Subject, 320 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Erwinia tracheiphila SCR3

 Score =  388 bits (996), Expect = e-112
 Identities = 199/310 (64%), Positives = 239/310 (77%), Gaps = 5/310 (1%)

Query: 8   VQFIDIDEDMAGQRIDNFLRNQLKNIPKSVVYRILRKGEVRVNKKRVKAEYKLEAGDVVR 67
           VQ + I  D AGQRIDNFLR QLK +PKS++YRILRKGE+RVNK RVK EYKLEAGD VR
Sbjct: 8   VQKVTISADEAGQRIDNFLRTQLKGVPKSMIYRILRKGELRVNKGRVKPEYKLEAGDEVR 67

Query: 68  VPPVTVEVKENEPAPPSTKLSKVAELEHCIVYEDDHLLILNKPSGTAVHGGSGLHFGAIE 127
           +PP+ V  +E E   P  KL+KVA L+  I++EDDHLL+LNKPSGTAVHGGSGL FG IE
Sbjct: 68  IPPLRVAEREEEAVSP--KLAKVAALDGAILFEDDHLLVLNKPSGTAVHGGSGLSFGVIE 125

Query: 128 ALRALRPQARFLELVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVQKYYYALVMGHWD 187
            LRALRP ARFLELVHR+DRDTSGILLVAKKRSALR L  Q REK +QK Y ALV G W 
Sbjct: 126 GLRALRPDARFLELVHRLDRDTSGILLVAKKRSALRSLHEQLREKGMQKDYLALVKGQWP 185

Query: 188 AECKVVNAPLLKNEVNS---IVRVNPNGKPSETRFRILEKFAEATLVQASPVTGRTHQIR 244
           +  K V  PLLKN + S   +VRV+  GKPSETRF++ E++A ATLV+ASPVTGRTHQIR
Sbjct: 186 SHLKTVQTPLLKNILQSGERVVRVSSEGKPSETRFKVEERYAYATLVKASPVTGRTHQIR 245

Query: 245 VHTQYMGHPIAWDDRYGDRRFDAYTAQFGIERLFLHAANIQFVHPASEKKLEIHAPLEAH 304
           VHT + GHPIA+DDRYG++ FD   A  G++RLFLHA  ++F HPA+ + + + APL+  
Sbjct: 246 VHTLHAGHPIAFDDRYGEKSFDMQLAGSGLKRLFLHALALRFTHPATGEVMRVKAPLDDE 305

Query: 305 LEQALTKMRQ 314
           L+  L  +R+
Sbjct: 306 LKGCLQALRK 315