Pairwise Alignments

Query, 315 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Escherichia coli ECRC62

 Score =  395 bits (1015), Expect = e-115
 Identities = 205/313 (65%), Positives = 240/313 (76%), Gaps = 7/313 (2%)

Query: 8   VQFIDIDEDMAGQRIDNFLRNQLKNIPKSVVYRILRKGEVRVNKKRVKAEYKLEAGDVVR 67
           V+ + I  D AGQRIDNFLR QLK +PKS++YRILRKGEVRVNKKR+K EYKLEAGD VR
Sbjct: 8   VKIVAITADEAGQRIDNFLRTQLKGVPKSMIYRILRKGEVRVNKKRIKPEYKLEAGDEVR 67

Query: 68  VPPVTVEVKENEPAPPSTKLSKVAELEHCIVYEDDHLLILNKPSGTAVHGGSGLHFGAIE 127
           +PPV V  +E E   P   L KVA L   I+YEDDH+L+LNKPSGTAVHGGSGL FG IE
Sbjct: 68  IPPVRVAEREEEAVSPH--LQKVAALADVILYEDDHILVLNKPSGTAVHGGSGLSFGVIE 125

Query: 128 ALRALRPQARFLELVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVQKYYYALVMGHWD 187
            LRALRP+ARFLELVHR+DRDTSG+LLVAKKRSALR L  Q REK +QK Y ALV G W 
Sbjct: 126 GLRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREKGMQKDYLALVRGQWQ 185

Query: 188 AECKVVNAPLLKNEVNS---IVRVNPNGKPSETRFRILEKFAEATLVQASPVTGRTHQIR 244
           +  K V APLLKN + S   IVRV+  GKPSETRF++ E++A ATLV+ SPVTGRTHQIR
Sbjct: 186 SHVKSVQAPLLKNILQSGERIVRVSQEGKPSETRFKVEERYAFATLVRCSPVTGRTHQIR 245

Query: 245 VHTQYMGHPIAWDDRYGDRRFDAY--TAQFGIERLFLHAANIQFVHPASEKKLEIHAPLE 302
           VHTQY GHPIA+DDRYGDR FD     A  G+ RLFLHAA ++F HP + + + I AP++
Sbjct: 246 VHTQYAGHPIAFDDRYGDREFDRQLTEAGTGLNRLFLHAAALKFTHPGTGEVMRIEAPMD 305

Query: 303 AHLEQALTKMRQA 315
             L++ L K+R A
Sbjct: 306 EGLKRCLQKLRNA 318