Pairwise Alignments

Query, 315 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., tRNA pseudouridine(65) synthase TruC from Escherichia coli ECRC62

 Score =  120 bits (301), Expect = 3e-32
 Identities = 81/231 (35%), Positives = 124/231 (53%), Gaps = 17/231 (7%)

Query: 97  IVYEDDHLLILNKPSGTAVHGGSGLHFGAIEALRALRPQ-ARFLELVHRIDRDTSGILLV 155
           I+Y+D+ L+ +NKPSG  VH         +  ++ +R Q  + +   HR+DR TSG+LL+
Sbjct: 4   ILYQDEWLVAVNKPSGWLVHRSWLDRDEKVVVMQTVRDQIGQHVFTAHRLDRPTSGVLLM 63

Query: 156 AKKRSALRHLQAQFREKTVQKYYYALVMGHWDAECKVVNAPL---LKNEVNSIVRVNPNG 212
                A R L  QF +  +QK Y+A+V G W  E  V++ PL   L    +   R +   
Sbjct: 64  GLSSEAGRLLAQQFEQHQIQKRYHAIVRG-WLMEEAVLDYPLVEELDKIADKFAREDKGS 122

Query: 213 KPSETRFRILE--KFAEAT---------LVQASPVTGRTHQIRVHTQYMGHPIAWDDRYG 261
           +P+ T +R L   +   AT         LV+  P TGR HQ+R H  ++ HPI  D ++G
Sbjct: 123 QPAVTHYRGLATVEMPVATGRYPTTRYGLVELEPKTGRKHQLRRHLAHLRHPIIGDSKHG 182

Query: 262 DRRFDAYTAQ-FGIERLFLHAANIQFVHPASEKKLEIHAPLEAHLEQALTK 311
           D R +   A+ FG++RL LHA+ +   HP + + L IHA L+    QAL++
Sbjct: 183 DLRQNRSGAEHFGLQRLMLHASQLSLTHPFTGEPLTIHAGLDDTWMQALSQ 233