Pairwise Alignments

Query, 315 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., 23S rRNA pseudouridine(1911/1915/1917) synthase RluD from Dickeya dianthicola ME23

 Score =  128 bits (321), Expect = 2e-34
 Identities = 94/313 (30%), Positives = 150/313 (47%), Gaps = 22/313 (7%)

Query: 13  IDEDMAGQRIDNFLRNQLKNIPKSVVYRILRKGEVRVNKKRV-KAEYKLEAGDVVRVPPV 71
           + E   GQR+D  L     +  +S +   + +  V++N   V K + K+  G+ V +  +
Sbjct: 11  VAESQLGQRLDQALAELFPDYSRSRIKTWILEQRVQINGNMVDKPKEKVLGGESVAIDAL 70

Query: 72  TVEVKENEPAPPSTKLSKVAELEHCIVYEDDHLLILNKPSGTAVHGGSGLHFGAI-EALR 130
             E    E  P S            IVYED  +L++NKP    VH G+G   G +  AL 
Sbjct: 71  IEEDARWEAQPISLD----------IVYEDGDILVINKPRNLVVHPGAGNPDGTVLNALL 120

Query: 131 ALRPQARFLE---LVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVQKYYYALVMGHWD 187
              P+   +    +VHR+D+DT+G+++VAK   A   L    + + + + Y A+ +G   
Sbjct: 121 HHYPEIVDVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQAREITREYEAVAIGTMT 180

Query: 188 AECKVVNAPLLKNEVNSIVRVNPNGKPSETRFRILEKFAEATLVQASPVTGRTHQIRVHT 247
           A   V       +   + + V+P GKP+ T +RI+E F   T ++    TGRTHQIRVH 
Sbjct: 181 AGGTVEEPIARHSTKRTHMAVHPMGKPAVTHYRIMEHFRAHTRLRLRLETGRTHQIRVHM 240

Query: 248 QYMGHPIAWDDRYGDR-RFDAYTAQFGIE------RLFLHAANIQFVHPASEKKLEIHAP 300
            ++ HP+  D  YG R R     ++  IE      R  LHA  ++  HP S  ++E HAP
Sbjct: 241 AHINHPLVGDPLYGGRPRLPKGASETFIETLRNFDRQALHATMLRLYHPISGIEMEWHAP 300

Query: 301 LEAHLEQALTKMR 313
           L   +   +  ++
Sbjct: 301 LPQDMVDLIAALK 313