Pairwise Alignments

Query, 315 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Vibrio cholerae E7946 ATCC 55056

Subject, 318 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Dickeya dadantii 3937

 Score =  394 bits (1012), Expect = e-114
 Identities = 204/310 (65%), Positives = 239/310 (77%), Gaps = 5/310 (1%)

Query: 8   VQFIDIDEDMAGQRIDNFLRNQLKNIPKSVVYRILRKGEVRVNKKRVKAEYKLEAGDVVR 67
           VQF+ +  + AGQRIDNFLR +LK +PKS++YRILRKGEVRVNKKR+K EYKL  GD VR
Sbjct: 8   VQFLTVSSEEAGQRIDNFLRTRLKGVPKSMIYRILRKGEVRVNKKRIKPEYKLLDGDEVR 67

Query: 68  VPPVTVEVKENEPAPPSTKLSKVAELEHCIVYEDDHLLILNKPSGTAVHGGSGLHFGAIE 127
           +PPV    +E EPA  S  L KV+ L  CI+YEDD+LL+LNKPSGTAVHGGSGL FG IE
Sbjct: 68  IPPVRQSERE-EPAV-SASLDKVSALVDCILYEDDYLLLLNKPSGTAVHGGSGLSFGVIE 125

Query: 128 ALRALRPQARFLELVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVQKYYYALVMGHWD 187
            LRALRP+ARFLELVHR+DRDTSG+LLVAKKRSALR L  Q R K +QK Y ALV G W 
Sbjct: 126 GLRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLRGKGMQKDYLALVRGQWQ 185

Query: 188 AECKVVNAPLLKNEVNS---IVRVNPNGKPSETRFRILEKFAEATLVQASPVTGRTHQIR 244
           + CK V APLLKN + S   IVRVN  GKPSET F++ E+F  ATLV+ASP+TGRTHQIR
Sbjct: 186 SHCKAVQAPLLKNVLQSGERIVRVNSEGKPSETLFKVEERFDCATLVRASPITGRTHQIR 245

Query: 245 VHTQYMGHPIAWDDRYGDRRFDAYTAQFGIERLFLHAANIQFVHPASEKKLEIHAPLEAH 304
           VHTQY GHPIA+DDRYGDR FDA  A  G++RLFLHA  ++F HP + + + I APL+A 
Sbjct: 246 VHTQYAGHPIAFDDRYGDREFDAQLAGTGLKRLFLHALALRFEHPHTGETMRIEAPLDAG 305

Query: 305 LEQALTKMRQ 314
           L   L  +RQ
Sbjct: 306 LRHCLQALRQ 315