Pairwise Alignments

Query, 315 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., pseudouridine synthase, RluA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  164 bits (415), Expect = 3e-45
 Identities = 103/324 (31%), Positives = 169/324 (52%), Gaps = 32/324 (9%)

Query: 11  IDIDEDMAGQRIDNFLRNQLKNIPKSVVYRILRKGEVRVNKKRVKAEYKLEAGDVVRVPP 70
           I +D+  A  R+D FL +++ N+ ++ V + +  G+V++N    KA YK++ GDV+ V  
Sbjct: 41  IAVDKGQAATRVDKFLTDKVANVTRNKVQQAIDNGQVKINGSNTKANYKIKPGDVITVV- 99

Query: 71  VTVEVKENEPAPPSTKLSKVAELEHCIVYEDDHLLILNKPSGTAVHGGSGLHFGAI---- 126
           + +E +E E  P    L         IV+EDDHLL++NKP+G  VH   G   G +    
Sbjct: 100 LEMEPRETEVLPEKLDLD--------IVHEDDHLLVVNKPAGMVVHPAYGNWTGTLVNGL 151

Query: 127 ----EALRALRPQARFLELVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVQKYYYALV 182
                 L  +   +    LVHRID+DTSG+L++AK   A+  L  QF + ++++ Y ALV
Sbjct: 152 VYHFSQLPEMPGNSGRPGLVHRIDKDTSGLLVIAKSEQAMTGLAKQFFDHSIERTYIALV 211

Query: 183 MGHWDAECKVVNAPLLKN----EVNSIVRVNPNGKPSETRFRILEKFAEATLVQASPVTG 238
            G    +   ++A + ++    +V  +      GK + T +++L++    +LVQ +  TG
Sbjct: 212 WGEPQEDAGTIDAHVGRSARDRKVMDVFPEGDQGKNAVTHWKVLKRLRYVSLVQCNLETG 271

Query: 239 RTHQIRVHTQYMGHPIAWDDRYG------DRRFDAYTAQFG-----IERLFLHAANIQFV 287
           RTHQIR H +Y+GHP+  D  YG        +F  Y A        + R  LHA ++ F 
Sbjct: 272 RTHQIRAHMKYLGHPLFNDAVYGGDKIRKGTQFSKYKAFVNNCFKLLPRQALHAKSLGFS 331

Query: 288 HPASEKKLEIHAPLEAHLEQALTK 311
           HP S+  L+  + L   ++  L +
Sbjct: 332 HPISQDFLQFTSNLPEDMQSVLER 355