Pairwise Alignments

Query, 174 a.a., 23S rRNA accumulation protein YceD from Vibrio cholerae E7946 ATCC 55056

Subject, 173 a.a., COG1399 protein, clustered with ribosomal protein L32p from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  172 bits (437), Expect = 2e-48
 Identities = 84/174 (48%), Positives = 115/174 (66%), Gaps = 2/174 (1%)

Query: 1   MQKVKIPRTVDPAKAAQKRLDFDGIIQVNLFKRLEESVAGVKRDAEVSLSFEIDEQQLVV 60
           MQKVK+P T+DP + AQKRLD+ GI   +  +R+ ESV  V  D E S+SF ID Q+L V
Sbjct: 1   MQKVKLPLTLDPVRTAQKRLDYQGIYTPDQVERVAESVVSVDSDVECSMSFAIDNQRLAV 60

Query: 61  ISGKANIEVDLECQRCNEVFAHECEVEFTYTPYLGRKSEEDAPDEYDLVDLNEFGEVDLV 120
           ++G A + V LECQRC + F H+    + ++P    +  E  P+ Y+ +++NEFGE+DL+
Sbjct: 61  LTGDAVVTVSLECQRCGKPFTHQVHTTYCFSPVRSDEQAEALPEAYEPIEVNEFGEIDLL 120

Query: 121 QLVEDEFILNLPQVAMHDEADCSVDSDNLVFGELPEEVLEEKPNPFDVLKSLKK 174
             VEDE IL LP V +HD   C V   ++VFGELP+E   +KPNPF VL SLK+
Sbjct: 121 ATVEDEIILALPVVPVHDSEHCEVSEADMVFGELPDEA--QKPNPFAVLASLKR 172