Pairwise Alignments

Query, 174 a.a., 23S rRNA accumulation protein YceD from Vibrio cholerae E7946 ATCC 55056

Subject, 173 a.a., Predicted metal-binding, possibly nucleic acid-binding protein from Enterobacter asburiae PDN3

 Score =  173 bits (438), Expect = 2e-48
 Identities = 84/174 (48%), Positives = 115/174 (66%), Gaps = 2/174 (1%)

Query: 1   MQKVKIPRTVDPAKAAQKRLDFDGIIQVNLFKRLEESVAGVKRDAEVSLSFEIDEQQLVV 60
           MQKVK+P T+DP + AQKRLD++GI   +  +R+ ESV  V  D E S+SF ID Q+L V
Sbjct: 1   MQKVKLPLTLDPVRTAQKRLDYEGIYTSDQAERIAESVVSVDSDVECSMSFAIDNQRLAV 60

Query: 61  ISGKANIEVDLECQRCNEVFAHECEVEFTYTPYLGRKSEEDAPDEYDLVDLNEFGEVDLV 120
           ++G A + V LECQRC + F       + ++P    +  E  P+ Y+ +++NEFGE+DL+
Sbjct: 61  LTGDAKVTVTLECQRCGKPFVQHVHTTYCFSPVRSDEQAEALPEAYEPIEVNEFGEIDLL 120

Query: 121 QLVEDEFILNLPQVAMHDEADCSVDSDNLVFGELPEEVLEEKPNPFDVLKSLKK 174
            LVEDE IL LP V +HD   C V   ++VFGELP+E   +KPNPF VL SLK+
Sbjct: 121 ALVEDEIILTLPVVPVHDSEHCEVSEADMVFGELPDEA--QKPNPFAVLASLKR 172