Pairwise Alignments

Query, 324 a.a., DNA polymerase III subunit delta' from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., DNA polymerase III delta prime subunit (EC 2.7.7.7) from Variovorax sp. SCN45

 Score = 94.4 bits (233), Expect = 4e-24
 Identities = 71/228 (31%), Positives = 96/228 (42%), Gaps = 29/228 (12%)

Query: 30  ATLIQASEGVGVESLVELMARTLMCTSSQSE--PCGFCHSCGLMQSGNHPDFHVVKPE-- 85
           A L+Q   G+G   L   +A   +C    +E   CG C SC  ++   H D  V+ PE  
Sbjct: 24  AWLLQGPSGIGQYELALALASAWLCEQPTAEGTACGHCASCHAIEVRTHADLCVLMPEVA 83

Query: 86  ---------------------KIGKSITVEQIRQMNRIAQESSQLSGYRLIVIEPADAMN 124
                                K  + I VE +R     AQ +S     +++++ PA+ MN
Sbjct: 84  MQELGWPLDEKAQADIDDKKRKASREIRVEAMRDAVGFAQRTSARGRGKVVLVYPAERMN 143

Query: 125 ESSANALLKTLEEPAPNCLFILVTSRIKHLLPTIVSRCQRLVLPAPTTALVVEWLKGQGI 184
             +ANALLKTLEEP  +  F+L +     LLPTI SRC    LP P TA    WL  Q +
Sbjct: 144 TITANALLKTLEEPVGDVRFVLASEAAWQLLPTIRSRCLGFTLPWPETAEAEAWLAAQDV 203

Query: 185 --TTPAYALHLCADSPLKTRAFMLEGGAEKYHELESQLMNALSGDVNA 230
                A  L      P         G + K   L  + M+   GDV A
Sbjct: 204 PAADAAALLRAAGGRPSDALRLARSGQSPKAWSLLPKAMS--RGDVGA 249