Pairwise Alignments

Query, 324 a.a., DNA polymerase III subunit delta' from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., DNA polymerase III subunit delta' from Escherichia coli ECOR38

 Score =  149 bits (376), Expect = 9e-41
 Identities = 103/316 (32%), Positives = 156/316 (49%), Gaps = 12/316 (3%)

Query: 8   YPWLVPVWQPWQAGLAAGKISSATLIQASEGVGVESLVELMARTLMCTSSQS-EPCGFCH 66
           YPWL P ++   A   AG+   A LIQA  G+G ++L+  ++R L+C   Q  + CG C 
Sbjct: 4   YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGEDALIYALSRYLLCQQPQGHKSCGHCR 63

Query: 67  SCGLMQSGNHPDFHVVKPEKIGKSITVEQIRQMNRIAQESSQLSGYRLIVIEPADAMNES 126
            C LMQ+G HPD++ + PEK   ++ ++ +R++     E ++L G +++ +  A  + ++
Sbjct: 64  GCQLMQAGTHPDYYTLAPEKGKNALGIDAVREVTEKLNEHARLGGAKVVWVTDAALLTDA 123

Query: 127 SANALLKTLEEPAPNCLFILVTSRIKHLLPTIVSRCQRLVLPAPTTALVVEWLKGQGITT 186
           +ANALLKTLEEP     F L T   + LL T+ SRC+   L  P     V WL  +   +
Sbjct: 124 AANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMS 183

Query: 187 P---AYALHLCADSPLKTRAFMLEGGAEKYHELESQLM--NALSGDVNAQLKCIALIDAD 241
                 AL L A SP    A + +G   +  E   Q +  +  SGD  + L   AL    
Sbjct: 184 QDALLAALRLSAGSPGAALA-LFQGDNWQARETLCQALAYSVQSGDWYSLL--AALNHEQ 240

Query: 242 LTTHLYWVWCVLTDAQKIHFGVQQDY---YPPASAALAGRFTYSKLHVQTASLERLMEQL 298
               L+W+  +L DA K H G  Q      P     LA   + S+L      +  + EQL
Sbjct: 241 APARLHWLATLLMDALKRHHGAAQVTNVDVPGLVVELANHLSPSRLQAILGDVCHIREQL 300

Query: 299 NQFSGLNTELLLLQWL 314
              +G+N ELL+   L
Sbjct: 301 MSVTGINRELLITDLL 316