Pairwise Alignments

Query, 255 a.a., YchF/TatD family DNA exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 258 a.a., hydrolase TatD from Pseudomonas simiae WCS417

 Score =  122 bits (307), Expect = 6e-33
 Identities = 71/257 (27%), Positives = 134/257 (52%), Gaps = 10/257 (3%)

Query: 3   VDSHCHLDKLDYQDLHADVSDVLDKAHQAKVEYLLSVGVTLDSFPKMLAMIEPFSQVYAS 62
           +D+H HLD   + D  +D  +VL  +    V  ++ +GV   ++ ++  +++    ++A+
Sbjct: 4   IDTHTHLD---FPDFDSDRREVLAHSRALGVRRMVVLGVYQQNWQRLWDLVQTDEGLFAA 60

Query: 63  CGVHPLDVQSDFSLDLFH------QYAQHPRVVAIGETGLDYHYQPETADLQKLRFRQQI 116
            G+HP+ +      DL        +   H ++ A+GE GLDY  +    + Q+  F  Q+
Sbjct: 61  FGLHPVYLDDHRPADLTELGDWLTRLHGHRQLCAVGEIGLDYFLEQLDRERQQSLFEAQL 120

Query: 117 ETAVALNKPLIIHTRNAQQDTLQLLREGKAQQCGGVIHCFTEDLAFAQAAMELGFYISIS 176
           + AV    P ++H R +  D +  L+  +  + GG+IH F      A+  ++LGF + + 
Sbjct: 121 KLAVDFQLPALLHVRRSHADVIATLKRIRLPR-GGIIHAFAGSREEAREYIKLGFKLGLG 179

Query: 177 GIVTFRQATDLKEVVKALPLDRLLIETDSPYLAPVPHRGKENQPAYVVEVAAYIAALKGV 236
           G  T+ QA  + +V+  LPLD +++ETDSP +AP  + G+ N P ++  +   +A   G+
Sbjct: 180 GAATWPQALRMHKVLAHLPLDAVVLETDSPDMAPAMYPGQRNSPEHLPAICTELAERMGI 239

Query: 237 SLTEVAQKTTQNFQNLF 253
               +A+ +T+N   LF
Sbjct: 240 RPLLLAEASTRNACELF 256