Pairwise Alignments

Query, 255 a.a., YchF/TatD family DNA exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 268 a.a., Uncharacterized metal-dependent hydrolase YcfH from Variovorax sp. SCN45

 Score =  209 bits (531), Expect = 6e-59
 Identities = 121/267 (45%), Positives = 160/267 (59%), Gaps = 18/267 (6%)

Query: 1   MFVDSHCHLDKLDYQDLHADVSDVLDKAHQAKVEYLLSVGVTLDSFPKMLAMIEPFSQVY 60
           MF DSHCHL   ++ D    +   +  A   +V+  L +   L+ F  + A+   +   +
Sbjct: 1   MFTDSHCHLTFPEFADQMPQIRAAMAAA---QVDRALCICTKLEEFDDVQALAASYDNFW 57

Query: 61  ASCGVHP--LDVQSDFSLDLFHQYAQHPRVVAIGETGLDYHYQPETA--------DLQKL 110
           AS GVHP   D+      DL    A+ PRVVAIGETGLDY+   E          + Q+ 
Sbjct: 58  ASVGVHPDNEDIAEPTVEDLVRLSAR-PRVVAIGETGLDYYQMEERKGGRSISDMEWQRD 116

Query: 111 RFRQQIETAVALNKPLIIHTRNAQQDTLQLLRE----GKAQQCGGVIHCFTEDLAFAQAA 166
           RFR  I  A    KPL+IHTR A  DTL +L+E    G  +  GGV HCFTE    A+AA
Sbjct: 117 RFRVHIRAAQQTRKPLVIHTREASADTLAILKEEGEDGAGKAAGGVFHCFTETAEVARAA 176

Query: 167 MELGFYISISGIVTFRQATDLKEVVKALPLDRLLIETDSPYLAPVPHRGKENQPAYVVEV 226
           ++LGFYIS SGI+TF++A DL++V   +PLDR+LIETDSPYLAPVP+RGK N P+YV  V
Sbjct: 177 LDLGFYISFSGILTFKKAQDLRDVAAFVPLDRMLIETDSPYLAPVPYRGKTNNPSYVPYV 236

Query: 227 AAYIAALKGVSLTEVAQKTTQNFQNLF 253
           A  IA L+ + +  VA+ T+ NF+ LF
Sbjct: 237 AQQIAELRKLPVEAVAKATSDNFETLF 263