Pairwise Alignments

Query, 255 a.a., YchF/TatD family DNA exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 262 a.a., Uncharacterized metal-dependent hydrolase YcfH from Sphingobium sp. HT1-2

 Score =  223 bits (567), Expect = 4e-63
 Identities = 118/258 (45%), Positives = 162/258 (62%), Gaps = 6/258 (2%)

Query: 1   MFVDSHCHLDKLDYQDLHADVSDVLDKAHQAKVEYLLSVGVTLDSFPKMLAMIEPFSQVY 60
           M +DSHCHL+   Y+ L  D  +VL++A    V+ +L++      +  +L      + V+
Sbjct: 1   MLIDSHCHLN---YKGLIEDQQNVLERARARGVDLMLNIATRESEWDDVLGTAVREADVW 57

Query: 61  ASCGVHPLDVQSDFSLDLFH--QYAQHPRVVAIGETGLDYHYQPETADLQKLRFRQQIET 118
           A+ G+HP +      +D     + A HPRVV IGETGLDY+Y     + Q+  FR  I  
Sbjct: 58  ATVGIHPHEADEHPHVDTAKLVERAAHPRVVGIGETGLDYYYDHSDRERQQKSFRSHIAA 117

Query: 119 AVALNKPLIIHTRNAQQDTLQLLREGKAQQC-GGVIHCFTEDLAFAQAAMELGFYISISG 177
                 PLI+HTR A++DTL ++R+   +    GVIHCFT   AFA AAMELGFYISISG
Sbjct: 118 CRETGLPLIVHTREAEEDTLAIMRDEMGKGAYSGVIHCFTASGAFADAAMELGFYISISG 177

Query: 178 IVTFRQATDLKEVVKALPLDRLLIETDSPYLAPVPHRGKENQPAYVVEVAAYIAALKGVS 237
           IVTF+ A DL+E    LPLDRLL+ETDSP+LAPVPHRGK  +PA+V + A ++A L+G S
Sbjct: 178 IVTFKSAKDLQETAARLPLDRLLVETDSPFLAPVPHRGKPCEPAFVADTARFLADLRGES 237

Query: 238 LTEVAQKTTQNFQNLFLR 255
           + ++A  T+ NF  LF +
Sbjct: 238 IEDLAAATSANFLRLFAK 255