Pairwise Alignments

Query, 255 a.a., YchF/TatD family DNA exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 265 a.a., Mg-dependent cytoplasmic DNase / RNase from Pseudomonas putida KT2440

 Score =  111 bits (278), Expect = 1e-29
 Identities = 76/254 (29%), Positives = 127/254 (50%), Gaps = 13/254 (5%)

Query: 12  LDYQDLHADVSDVLDKAHQAKVEYLLSVGVTLDSFPKMLAMIEPF----SQVYASCGVHP 67
           L     H   + ++++A +A V  +L  G +L    + L + +      + ++A+ GVHP
Sbjct: 10  LTNSSFHDQQAAIVERALEAGVTQMLLTGTSLAVSEQALELCQQLDASGAHLFATAGVHP 69

Query: 68  LDVQSDFSLDLFHQYA---QHPRVVAIGETGLDYHYQPETADLQKLRFRQQIETAVALNK 124
            D ++ +  D   Q       PRV A+GE GLD++       LQ+     Q+  A  L  
Sbjct: 70  HDAKA-WDTDSERQLRLLLSEPRVRAVGECGLDFNRDFSPRPLQEKALEAQLTLAAQLRL 128

Query: 125 PLIIHTRNAQQDTLQLLREGKAQQCGGVIHCFTEDLAFAQAAMELGFYISISG-IVTFRQ 183
           P+ +H R+A +  L +L++ +    G V+HCFT +     A ++L  +I I+G I   R+
Sbjct: 129 PVFLHERDASERLLAILKDYRDHLTGAVVHCFTGEREALFAYLDLDLHIGITGWICDERR 188

Query: 184 ATDLKEVVKALPLDRLLIETDSPYLAPVPHRGK----ENQPAYVVEVAAYIAALKGVSLT 239
            T L  +V  +P  RL++E+D+PYL P   R K     N+PA++ EV   +A  +G S  
Sbjct: 189 GTHLHPLVGNIPEGRLMLESDAPYLLPRSLRPKPKSGRNEPAFLPEVLREVALHRGESAE 248

Query: 240 EVAQKTTQNFQNLF 253
             A  TT   ++ F
Sbjct: 249 HTAAHTTATARDFF 262