Pairwise Alignments

Query, 255 a.a., YchF/TatD family DNA exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 258 a.a., putative hydrolase from Pseudomonas putida KT2440

 Score =  123 bits (309), Expect = 3e-33
 Identities = 80/259 (30%), Positives = 137/259 (52%), Gaps = 14/259 (5%)

Query: 3   VDSHCHLDKLDYQDLHADVSDVLDKAHQAKVEYLLSVGVTLDSFPKM--LAMIEPFSQVY 60
           +D+H HLD   + D  AD   +L  A    +E ++ +GV   +F ++  LA  EP  +++
Sbjct: 4   IDTHTHLD---FPDFDADRPRLLANAAARGLERMVVLGVYQANFQRVWELACAEP--RLF 58

Query: 61  ASCGVHP--LDVQSDFSLDLFHQYAQ----HPRVVAIGETGLDYHYQPETADLQKLRFRQ 114
           A+ G+HP  LD      L    ++ +    +PR+ A+GE GLDY+        Q+  F  
Sbjct: 59  AALGLHPVYLDQHRPEHLVQLREWLERLRDNPRLCAVGEFGLDYYLADLDKTRQQALFEA 118

Query: 115 QIETAVALNKPLIIHTRNAQQDTLQLLREGKAQQCGGVIHCFTEDLAFAQAAMELGFYIS 174
           Q++ A     P ++H R +    +  L+  K  + G VIH F      A+  ++LGF + 
Sbjct: 119 QLQMACDFELPALLHVRRSHAQVIATLKRYKPARAG-VIHAFAGSYEEAREYIKLGFLLG 177

Query: 175 ISGIVTFRQATDLKEVVKALPLDRLLIETDSPYLAPVPHRGKENQPAYVVEVAAYIAALK 234
           + G  T+ QA  L++ +  LPL+ +++ETDSP +AP  + G  N P ++ E+A  +A + 
Sbjct: 178 LGGAGTWPQALRLRKTLARLPLESVVLETDSPDMAPAMYPGVRNSPEHLPEIATALAHVM 237

Query: 235 GVSLTEVAQKTTQNFQNLF 253
           G+ +  +AQ +T+N   LF
Sbjct: 238 GLDVEVLAQASTRNACTLF 256