Pairwise Alignments

Query, 255 a.a., YchF/TatD family DNA exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 263 a.a., putative metal-dependent hydrolase YcfH from Pseudomonas sp. DMC3

 Score =  256 bits (653), Expect = 4e-73
 Identities = 131/255 (51%), Positives = 172/255 (67%), Gaps = 3/255 (1%)

Query: 1   MFVDSHCHLDKLDYQDLHADVSDVLDKAHQAKVEYLLSVGVTLDSFPKMLAMIEPFSQVY 60
           M VDSHCHLD+LD       +   L  A +  V + L +GV+ D+   + A+ E +  V 
Sbjct: 1   MLVDSHCHLDRLDLAAHDGSLDAALAAARERGVGHFLCIGVSADNAADVKALAERYDDVD 60

Query: 61  ASCGVHPLDVQSDFS--LDLFHQYAQHPRVVAIGETGLDYHYQPETADLQKLRFRQQIET 118
            S GVHPLDVQ   +  LD       HP+VVAIGETGLDYHY+PE A+LQ+  FR  ++ 
Sbjct: 61  CSVGVHPLDVQPGAAPALDWLLHELNHPKVVAIGETGLDYHYEPEAAELQQESFRLHLQA 120

Query: 119 AVALNKPLIIHTRNAQQDTLQLLREGKAQQCGGVIHCFTEDLAFAQAAMELGFYISISGI 178
           A    KP+IIHTR A+ DTL+LLRE    Q G V+HCFTED   A+AA+++G+YIS+SGI
Sbjct: 121 AQQTGKPVIIHTRGARADTLELLREAALPQAG-VLHCFTEDWDMAKAALDMGYYISLSGI 179

Query: 179 VTFRQATDLKEVVKALPLDRLLIETDSPYLAPVPHRGKENQPAYVVEVAAYIAALKGVSL 238
           VTFR A  L++V   +P DRLL+ETDSPYLAP+P+RGK N P YV EVA ++A L+G + 
Sbjct: 180 VTFRNADALRDVASKVPADRLLVETDSPYLAPIPYRGKPNLPQYVREVAEFLAMLRGENY 239

Query: 239 TEVAQKTTQNFQNLF 253
              A++TT+NF+ LF
Sbjct: 240 ERFAEQTTENFKRLF 254