Pairwise Alignments

Query, 255 a.a., YchF/TatD family DNA exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 270 a.a., Putative deoxyribonuclease YcfH from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  222 bits (565), Expect = 7e-63
 Identities = 126/267 (47%), Positives = 172/267 (64%), Gaps = 17/267 (6%)

Query: 1   MFVDSHCHLDKLDYQDLHADVSDVLDKAHQAKVEYLLSVGVTLDSFPKMLAMIEPFSQVY 60
           MF DSHCHL    + +L A + D+L+   QA+V+  L +  TL+ F  + ++      ++
Sbjct: 1   MFTDSHCHLS---FPELRAQLPDILEAMSQAQVDRALCICTTLEEFEDVYSLARDHDHLW 57

Query: 61  ASCGVHP-LDVQSDFSLDLFHQYAQHPRVVAIGETGLDYHYQPE--TADL--QKLRFRQQ 115
           ++ GVHP  D   + +L+   + A  PRVV IGETGLDY+   E   AD+  Q+ RFR  
Sbjct: 58  STVGVHPDSDEVQEPTLEDLLERAARPRVVGIGETGLDYYRLGERTVADMEWQRERFRVH 117

Query: 116 IETAVALNKPLIIHTRNAQQDTLQLLRE-------GKAQQ--CGGVIHCFTEDLAFAQAA 166
           I  A   + PL+IHTR++  DT+ +LRE        +A Q    GV HCFTE +A A+AA
Sbjct: 118 IRAARQTSLPLVIHTRSSSDDTVAILREEGGFASDSRAGQGPAKGVFHCFTESMAVARAA 177

Query: 167 MELGFYISISGIVTFRQATDLKEVVKALPLDRLLIETDSPYLAPVPHRGKENQPAYVVEV 226
           ++LGF+IS SGI+TFR A DL+EV   +PLDR LIETDSPYLAPVP+RGK N PAYV  V
Sbjct: 178 LDLGFFISFSGILTFRNAADLREVAAYVPLDRTLIETDSPYLAPVPYRGKTNTPAYVPFV 237

Query: 227 AAYIAALKGVSLTEVAQKTTQNFQNLF 253
           A  +A LKG+S+  VA+ T++NF+ LF
Sbjct: 238 ARQVAELKGLSVEAVAEATSRNFEQLF 264