Pairwise Alignments

Query, 255 a.a., YchF/TatD family DNA exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., TatD family deoxyribonuclease from Magnetospirillum magneticum AMB-1

 Score =  218 bits (554), Expect = 1e-61
 Identities = 114/256 (44%), Positives = 163/256 (63%), Gaps = 6/256 (2%)

Query: 1   MFVDSHCHLDKLDYQDLHADVSDVLDKAHQAKVEYLLSVGVTLDSFPKMLAMIEPFSQVY 60
           M VDSHCHLD  D+ D   D+  V+ +A  A V  LL++G  +  + +++ + E F  V+
Sbjct: 1   MLVDSHCHLDFPDFAD---DLDGVVGRAGAAGVGVLLTIGTHVTRYDQVVKVAERFDNVW 57

Query: 61  ASCGVHPLD--VQSDFSLDLFHQYAQHPRVVAIGETGLDYHYQPETADLQKLRFRQQIET 118
           A+ G+HP +  V+    LD   + A+HP+VVA GETGLDY+Y     + Q+  FR  IE 
Sbjct: 58  ATVGIHPHEAGVEPYADLDTLLRLAEHPKVVAFGETGLDYYYDKSPREQQRHSFRIHIEA 117

Query: 119 AVALNKPLIIHTRNAQQDTLQLLREGKAQQC-GGVIHCFTEDLAFAQAAMELGFYISISG 177
           A     P+I+HTR+A  DT  +L E   +    G+IHCF+    FA+ A++LG +IS SG
Sbjct: 118 ARRTGLPVIVHTRDADDDTAAILAEEMGKGAFTGLIHCFSSRPDFAEKAVKLGLFISASG 177

Query: 178 IVTFRQATDLKEVVKALPLDRLLIETDSPYLAPVPHRGKENQPAYVVEVAAYIAALKGVS 237
           I+TF+ A  L++ +  +PLDRLL+ETD+PYLAP+P RGK N+PAYV   AA +A +KGV+
Sbjct: 178 IMTFKTADILRDTLAGVPLDRLLVETDAPYLAPIPFRGKRNEPAYVAHTAARLAEVKGVT 237

Query: 238 LTEVAQKTTQNFQNLF 253
           + E+   TT NF  LF
Sbjct: 238 MAEMETATTDNFHRLF 253