Pairwise Alignments

Query, 255 a.a., YchF/TatD family DNA exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., predicted DNase (NCBI) from Escherichia coli BW25113

 Score =  125 bits (315), Expect = 7e-34
 Identities = 77/256 (30%), Positives = 131/256 (51%), Gaps = 8/256 (3%)

Query: 2   FVDSHCHLDKLDYQDLHADVSDVLDKAHQAKVEYLLSVGVTLDSFPKMLAMIEPFSQVYA 61
           F+D+HCH D   +     D    L +A QA V  ++      ++F ++LA+ E +  +YA
Sbjct: 5   FIDTHCHFD---FPPFSGDEEASLQRAAQAGVGKIIVPATEAENFARVLALAENYQPLYA 61

Query: 62  SCGVHP--LDVQSDFSLDLFHQYAQH--PRVVAIGETGLDYHYQPETADLQKLRFRQQIE 117
           + G+HP  L+  SD SL+   Q  +    +VVA+GE GLD        + Q+    +Q++
Sbjct: 62  ALGLHPGMLEKHSDVSLEQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLK 121

Query: 118 TAVALNKPLIIHTRNAQQDTLQLLREGKAQQCGGVIHCFTEDLAFAQAAMELGFYISISG 177
            A   + P+I+H+R         L+     + G V+H F+  L  A+  ++LG+ I + G
Sbjct: 122 LAKRYDLPVILHSRRTHDKLAMHLKRHDLPRTG-VVHGFSGSLQQAERFVQLGYKIGVGG 180

Query: 178 IVTFRQATDLKEVVKALPLDRLLIETDSPYLAPVPHRGKENQPAYVVEVAAYIAALKGVS 237
            +T+ +A+  ++V+  LPL  LL+ETD+P +     +G+ N+P     V A +  L+   
Sbjct: 181 TITYPRASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFAVLCELRREP 240

Query: 238 LTEVAQKTTQNFQNLF 253
             E+AQ    N   LF
Sbjct: 241 ADEIAQALLNNTYTLF 256