Pairwise Alignments

Query, 255 a.a., YchF/TatD family DNA exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., metal-dependent hydrolase from Escherichia coli ECRC62

 Score =  122 bits (307), Expect = 6e-33
 Identities = 75/256 (29%), Positives = 130/256 (50%), Gaps = 8/256 (3%)

Query: 2   FVDSHCHLDKLDYQDLHADVSDVLDKAHQAKVEYLLSVGVTLDSFPKMLAMIEPFSQVYA 61
           F+D+HCH D   +     D    L +A QA V  ++      ++F ++ A+ E +  +YA
Sbjct: 5   FIDTHCHFD---FPPFSGDEEASLQRAAQAGVGKIIVPATEAENFARVQALAEKYQPLYA 61

Query: 62  SCGVHP--LDVQSDFSLDLFHQYAQH--PRVVAIGETGLDYHYQPETADLQKLRFRQQIE 117
           + G+HP  L+  SD SLD   Q  +    +VVA+GE GLD        + Q+    +Q++
Sbjct: 62  ALGLHPGMLEKHSDVSLDQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLK 121

Query: 118 TAVALNKPLIIHTRNAQQDTLQLLREGKAQQCGGVIHCFTEDLAFAQAAMELGFYISISG 177
            A   + P+I+H+R         L+     + G V+H F+  L  A+  ++LG+ I + G
Sbjct: 122 LAKRYDLPVILHSRRTHDKLAMHLKRHDLPRTG-VVHGFSGSLQQAERFVQLGYKIGVGG 180

Query: 178 IVTFRQATDLKEVVKALPLDRLLIETDSPYLAPVPHRGKENQPAYVVEVAAYIAALKGVS 237
            +T+ +A+  ++V+  LPL  LL+ETD+P +     +G+ N+P     V A +  L+   
Sbjct: 181 TITYPRASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQANRPEQAARVFAVLCELRSEP 240

Query: 238 LTEVAQKTTQNFQNLF 253
             E+A+    N   +F
Sbjct: 241 ADEIAEVLLNNTYAVF 256