Pairwise Alignments

Query, 255 a.a., YchF/TatD family DNA exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., 3'-5' ssDNA/RNA exonuclease TatD from Escherichia coli ECOR38

 Score =  122 bits (307), Expect = 6e-33
 Identities = 78/241 (32%), Positives = 122/241 (50%), Gaps = 7/241 (2%)

Query: 20  DVSDVLDKAHQAKVEYLLSVGVTLDSFPKMLAMIEPFSQVYASCGVHPLDVQS--DFSLD 77
           D  DV+ +A  A V+ LL  G  L    +   +   +S  +++ GVHP D       + +
Sbjct: 16  DRDDVVARAFDAGVDGLLITGTNLHESQQAQKLARQYSSCWSTAGVHPHDSSQWQAATEE 75

Query: 78  LFHQYAQHPRVVAIGETGLDYHYQPETADLQKLRFRQQIETAVALNKPLIIHTRNAQQDT 137
              + A  P VVAIGE GLD++    T + Q+  F  Q+  A  LN P+ +H R+A +  
Sbjct: 76  AIIELAAQPEVVAIGECGLDFNRNFSTPEEQERAFVAQLRIAAELNMPVFMHCRDAHERF 135

Query: 138 LQLLREGKAQQCGGVIHCFTEDLAFAQAAMELGFYISISG-IVTFRQATDLKEVVKALPL 196
           + LL     +  G V+HCFT      QA +  G YI I+G +   R+  +L+E++  +P 
Sbjct: 136 MTLLEPWLDKLPGAVLHCFTGTREEMQACVARGIYIGITGWVCDERRGLELRELLPLIPA 195

Query: 197 DRLLIETDSPYLAP----VPHRGKENQPAYVVEVAAYIAALKGVSLTEVAQKTTQNFQNL 252
           ++LLIETD+PYL P         + N+PA++  +   IA  +G     +A  T  N + L
Sbjct: 196 EKLLIETDAPYLLPRDLTPKPSSRRNEPAHLPHILQRIAHWRGEDAAWLAATTDANVKTL 255

Query: 253 F 253
           F
Sbjct: 256 F 256