Pairwise Alignments

Query, 255 a.a., YchF/TatD family DNA exonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., putative deoxyribonuclease YcfH from Alteromonas macleodii MIT1002

 Score =  268 bits (685), Expect = 8e-77
 Identities = 140/253 (55%), Positives = 176/253 (69%), Gaps = 2/253 (0%)

Query: 1   MFVDSHCHLDKLDYQDLHADVSDVLDKAHQAKVEYLLSVGVTLDSFPKMLAMIEPFSQVY 60
           MFVDSHCHLD+L       ++++ L+ A    VE+ L V V++  +  MLA +  F  V 
Sbjct: 1   MFVDSHCHLDRLKQGP--EELAETLNFARTRGVEHFLCVCVSVGDYDSMLAAVSQFEDVS 58

Query: 61  ASCGVHPLDVQSDFSLDLFHQYAQHPRVVAIGETGLDYHYQPETADLQKLRFRQQIETAV 120
            SCGVHPL      S +   + AQ   VVAIGETGLDY Y PE+ ++Q   F   I+ A 
Sbjct: 59  VSCGVHPLHQDEACSYEELLEKAQREEVVAIGETGLDYFYSPESKEVQLTSFVDHIKVAN 118

Query: 121 ALNKPLIIHTRNAQQDTLQLLREGKAQQCGGVIHCFTEDLAFAQAAMELGFYISISGIVT 180
              KPLIIHTR+A++DT+ LLR+ KA    GV+HCFTE L  A AA+E+ FYISISGIVT
Sbjct: 119 ETKKPLIIHTRDAREDTINLLRQHKAAHTKGVLHCFTESLDMALAAIEMDFYISISGIVT 178

Query: 181 FRQATDLKEVVKALPLDRLLIETDSPYLAPVPHRGKENQPAYVVEVAAYIAALKGVSLTE 240
           F  A +L+EVVK +PL+RLLIETDSP+LAPVPHRGK+NQP YVVEVA +IA LKGV++ E
Sbjct: 179 FNSADELREVVKEIPLERLLIETDSPWLAPVPHRGKQNQPGYVVEVAEFIAELKGVTVKE 238

Query: 241 VAQKTTQNFQNLF 253
           +A+ TTQNF  LF
Sbjct: 239 LAEITTQNFYTLF 251