Pairwise Alignments

Query, 500 a.a., PTS glucose transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

Subject, 571 a.a., PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) from Pseudomonas fluorescens GW456-L13

 Score =  337 bits (863), Expect = 9e-97
 Identities = 191/472 (40%), Positives = 283/472 (59%), Gaps = 20/472 (4%)

Query: 25  MFKNAFANLQKVGKALMLPVSVLPVAGILLGVGAANFSWLPEVVSHLMEQAGGSVFGQMP 84
           M++     LQ++G+ALMLP+++LP+AG+LL +G  +   +      ++  AG  +F  + 
Sbjct: 1   MYQLFIEGLQRLGRALMLPIAILPIAGLLLRLGDTDLLNIA-----IIHDAGQVIFANLA 55

Query: 85  LLFAVGVALGFT-NNDGVSGLSAIVGYGIMVATLKVMATVMGVSGIDTGVLGGILAGGVA 143
           ++FA+G+A+GF  +N+G +GL+ ++GY +M++TLK +        I+ G+L GI++G +A
Sbjct: 56  MIFAIGIAVGFARDNNGTAGLAGVIGYLVMISTLKALDP-----SINMGMLAGIVSGLMA 110

Query: 144 AWSFNRFYKIQLPEYLGFFAGKRAVPIITGFISIALGVVLSFIWPPIGSAIATFSDWAAN 203
              +NRF  I+LPEYL FF G+R VPI+TGF ++ LGVV  +IWPPI   I +F      
Sbjct: 111 GALYNRFKDIKLPEYLAFFGGRRFVPIVTGFAAVGLGVVFGYIWPPIQHGINSFGTLMME 170

Query: 204 QDPVTAFGIYGIVERSLIPFGLHHIWNVPFFYQAGTCVNGAGETVNGIMTCFLTADDASR 263
                AF ++G+  R LI  GLHHI N   ++  G   N    T   ++T  L+   A  
Sbjct: 171 SGSFGAF-VFGLFNRLLIVTGLHHILNNMAWFVFG---NFTDPTTGALVTGDLSRYFAGD 226

Query: 264 AAGNGFGQLAGGYLFKMFGLPAAAFAIAHCAKPENRAKVMGIMASAALTSFLTGITEPIE 323
             G  F  + G +   +FGLPAA  A+   A P  R  + GI  S ALT+FLTG+TEPIE
Sbjct: 227 PKGGQF--MTGMFPMMIFGLPAACLAMYRNALPARRKVMGGIFLSMALTAFLTGVTEPIE 284

Query: 324 FAFLFVAPVLYAIHAVLAGLAYVLTNALGVVHGHTFSNGFIDFVVQSPRADNMLLLVGLG 383
           FAF+F+AP+L+ +HA+L GL+  +TNAL +  G TFS GFID ++   ++ N  L+  +G
Sbjct: 285 FAFMFLAPLLFVLHALLTGLSMAITNALNIHLGFTFSGGFIDMILGWGKSTNGWLVFPVG 344

Query: 384 IGYAVLYYVVFTFVIRALNLKTPGREDES-ADKSASSGNELAGDLVAAFGGKANITNLDA 442
           + YAV+YYVVF F IR  +LKTPGRE  +  ++ A + NE AG  + A GG  N+  + A
Sbjct: 345 LAYAVIYYVVFDFCIRRFDLKTPGRETSADVEQVAVADNERAGAYIKALGGAENLITVGA 404

Query: 443 CITRLRVSVADTALVDQDKLKKLGAAGVVM--VSGGVQAIFGTKSDNLKTEM 492
           C TRLR+ + D        LK LGA  VV     G +Q + G  +D +  E+
Sbjct: 405 CTTRLRLDMVDRNKASDTDLKALGAMAVVRPGKGGSLQVVVGPMADAIADEI 456



 Score = 40.0 bits (92), Expect = 2e-07
 Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 3/93 (3%)

Query: 403 LKTPGREDESADKSASSGNELAGDLVAAFGGKANITNLDA-CITRLRVSVADTALVDQDK 461
           + +P  E ++   +A +  E A   + A GG  N+  LD   +TR+R+ +AD   + +  
Sbjct: 468 VSSPAAEIDAPPPAAMATPE-AQQWLNALGGGDNVLQLDCVAMTRIRLQLADGKALSEFD 526

Query: 462 LKKLGAAGVVMVSGGV-QAIFGTKSDNLKTEMD 493
           LK LG  GV  + GG+   + G K+  L   ++
Sbjct: 527 LKALGCQGVSQLDGGIWHLLIGDKAPTLSDALE 559