Pairwise Alignments

Query, 500 a.a., PTS glucose transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

Subject, 558 a.a., PTS system, N-acetylglucosamine-specific IIC component / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.193) / PTS system, inactive IIB catalytic domain from Sphingobium sp. HT1-2

 Score =  311 bits (796), Expect = 5e-89
 Identities = 188/480 (39%), Positives = 273/480 (56%), Gaps = 37/480 (7%)

Query: 31  ANLQKVGKALMLPVSVLPVAGILLGVGAANFSWLPEVVSHLMEQAGGSVFGQMPLLFAVG 90
           A LQ +G+ALMLP++VLP+A +LL +G  +   +P V +     AG ++F  + LLFA G
Sbjct: 10  ARLQPLGRALMLPIAVLPIAALLLRLGQPDMLAIPFVAA-----AGDAIFSNLGLLFAAG 64

Query: 91  VALGFTN-NDGVSGLSAIVGYGIMVATLKVM------------ATVMGVSGIDTGVLGGI 137
           VA+G    N G + L+ ++ Y +     KV+            A           V  GI
Sbjct: 65  VAVGLARENHGAASLAGVIAYLVTTEGAKVLLVLPPDVAEAAQAAWRAKEIAKVSVPAGI 124

Query: 138 LAGGVAAWSFNRFYKIQLPEYLGFFAGKRAVPIITGFISIALGVVLSFIWPPIGSAIATF 197
           L+G VA   +NRF  I+LP+YL FFAG+R VPI+ G   +   ++    +P I + I   
Sbjct: 125 LSGIVAGLLYNRFSDIKLPDYLAFFAGRRFVPIVAGLAGLFGALMFGLGFPWIEAGIDRL 184

Query: 198 SDWAANQDPVTAFGIYGIVERSLIPFGLHHIWNVPFFYQAGTCVNGAGETVNGIMTCFLT 257
           S W     P+  F +YG++ R L+  GLHHI N   ++  G      G+        F  
Sbjct: 185 SQWVVAAGPLGLF-VYGLLNRLLLITGLHHIINNVAWFLLGDFHGATGDIKR-----FFA 238

Query: 258 ADDASRAAGNGFGQLAGGYLFKMFGLPAAAFAIAHCAKPENRAKVMGIMASAALTSFLTG 317
            D  +       G ++G +   MFGLPAA  A+   A P+ R +V G++ S ALTSFLTG
Sbjct: 239 GDPTAG------GFMSGFFPVMMFGLPAACLAMYRTALPDRRKRVGGLLLSLALTSFLTG 292

Query: 318 ITEPIEFAFLFVAPVLYAIHAVLAGLAYVLTNALGVVHGHTFSNGFIDFVVQSPRADNML 377
           +TEPIEF+F+F+AP+LY +HAVL GL+ V+ +ALGV  G  FS G  D+++    A   L
Sbjct: 293 VTEPIEFSFIFLAPILYVVHAVLTGLSMVVMDALGVKLGFGFSAGLFDYLMNYGLATKPL 352

Query: 378 LLVGLGIGYAVLYYVVFTFVIRALNLKTPGREDESADKSASSGNELAG----DLVAAFGG 433
           +L+ +GI Y  +YY  F++ IR  NLKTPGREDE A  +A+    +AG     +VAA GG
Sbjct: 353 MLIPVGIVYFAVYYATFSWCIRRFNLKTPGREDEPA--AAAEMPSVAGARGPAMVAALGG 410

Query: 434 KANITNLDACITRLRVSVADTALVDQDKLKKLGAAGVVMV-SGGVQAIFGTKSDNLKTEM 492
           KAN+ ++DAC TRLR+ + D+ + D+ +L+ LGA GVV +  GG Q + G  +D +  E+
Sbjct: 411 KANVRSVDACTTRLRLVLGDSTIADEARLRALGARGVVRLRDGGFQVVLGPIADQVAAEI 470