Pairwise Alignments

Query, 500 a.a., PTS glucose transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

Subject, 571 a.a., Putative PTS system glucosamine-specific EIICBA component from Pseudomonas sp. RS175

 Score =  344 bits (883), Expect = 4e-99
 Identities = 194/473 (41%), Positives = 290/473 (61%), Gaps = 22/473 (4%)

Query: 25  MFKNAFANLQKVGKALMLPVSVLPVAGILLGVGAANFSWLPEVVSHLMEQAGGSVFGQMP 84
           M+++    LQ++G+ALMLP+++LP+AG+LL +G  +   +      ++  AG ++F  +P
Sbjct: 1   MYQHFIEGLQRLGRALMLPIAILPIAGLLLRLGDTDLLNIA-----IIHDAGQAIFANLP 55

Query: 85  LLFAVGVALGFT-NNDGVSGLSAIVGYGIMVATLKVMATVMGVSGIDTGVLGGILAGGVA 143
           ++FA+G+A+GF  +N+G +GL+  +GY +M+ATLKV+      + I+ G+L GI++G +A
Sbjct: 56  MIFAIGIAVGFARDNNGTAGLAGAIGYLVMIATLKVLD-----ASINMGMLAGIISGLLA 110

Query: 144 AWSFNRFYKIQLPEYLGFFAGKRAVPIITGFISIALGVVLSFIWPPIGSAIATFSDWAAN 203
              +NRF  I+LPEYL FF G+R VPI+TGF ++ LGVV   IWPPI + I  F      
Sbjct: 111 GALYNRFKDIKLPEYLAFFGGRRFVPIVTGFSAVGLGVVFGLIWPPIQAGINGFGALLME 170

Query: 204 QDPVTAFGIYGIVERSLIPFGLHHIWNVPFFYQAGTCVNG-AGETVNGIMTCFLTADDAS 262
                AF ++G+  R LI  GLHHI N   ++  G+  +   G  V G +T +   D   
Sbjct: 171 SGSFGAF-VFGVFNRLLIVTGLHHILNNMAWFIFGSFTDPQTGAVVTGDLTRYFAGDP-- 227

Query: 263 RAAGNGFGQLAGGYLFKMFGLPAAAFAIAHCAKPENRAKVMGIMASAALTSFLTGITEPI 322
               NG   + G +   +FGLPAA  A+   A P+ R  + GI+ S ALTSFLTG+TEP+
Sbjct: 228 ----NGGQFMTGMFPVMLFGLPAACLAMYRNALPQRRKVMGGILLSMALTSFLTGVTEPV 283

Query: 323 EFAFLFVAPVLYAIHAVLAGLAYVLTNALGVVHGHTFSNGFIDFVVQSPRADNMLLLVGL 382
           EFAF+F+AP+L+ +HA+L GL+  +T+ L +  G TFS GFID V+   ++ N  L+V +
Sbjct: 284 EFAFMFLAPLLFLLHALLTGLSMAITDWLNIRLGFTFSGGFIDMVLGWGKSSNGWLVVPV 343

Query: 383 GIGYAVLYYVVFTFVIRALNLKTPGREDESA-DKSASSGNELAGDLVAAFGGKANITNLD 441
           G+ YAV+YY VF F IR  +LKTPGRED  A DK   + ++ AG  + A GG  N+  + 
Sbjct: 344 GLVYAVIYYTVFDFCIRRFDLKTPGREDVPAMDKPVVAQHQRAGAYIQALGGADNLITVG 403

Query: 442 ACITRLRVSVADTALVDQDKLKKLGAAGVVMV--SGGVQAIFGTKSDNLKTEM 492
           AC TRLR+ + D       +LK LGA  VV     G +Q + G  +D++  E+
Sbjct: 404 ACTTRLRLDMVDRNKACDAQLKALGAMAVVRPGNGGSLQVVVGPMADSIADEI 456



 Score = 42.0 bits (97), Expect = 6e-08
 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 11/79 (13%)

Query: 410 DESADKSASSGNELAGDLVA----------AFGGKANITNLDA-CITRLRVSVADTALVD 458
           D  A   A++ NE A   V           A GG+ N+  LD   ++RLRV +AD   + 
Sbjct: 464 DRHASTGAATANETAATPVVPAAEARQWMDALGGEGNVLQLDCVAMSRLRVRLADGRQLS 523

Query: 459 QDKLKKLGAAGVVMVSGGV 477
           + +L+ LG  GV  + GGV
Sbjct: 524 ESQLRTLGCQGVSALEGGV 542