Pairwise Alignments

Query, 500 a.a., PTS glucose transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

Subject, 585 a.a., N-acetylglucosamine-specific PTS transporter subunit IIBC from Paraburkholderia sabiae LMG 24235

 Score =  353 bits (907), Expect = e-102
 Identities = 207/492 (42%), Positives = 296/492 (60%), Gaps = 37/492 (7%)

Query: 28  NAFANLQKVGKALMLPVSVLPVAGILLGVGAANFSWLPEVVS-HLMEQAGGSVFGQMPLL 86
           N F  +Q++G+ALMLP++VLPVAG+LL +G       P+V +  ++  AGG++F  +PLL
Sbjct: 4   NPFLKIQRLGRALMLPIAVLPVAGLLLRLGQ------PDVFNIKMIADAGGAIFDNLPLL 57

Query: 87  FAVGVALGFT-NNDGVSGLSAIVGYGIMVATLKVMATVMGVSGIDTGVLGGILAGGVAAW 145
           FA+GVA+GF  +N+GV+ L+  +GY + VA +K +   + +     GVL GI+AG VA  
Sbjct: 58  FAIGVAVGFAKDNNGVAALAGAIGYLVEVAVMKDINDKLNM-----GVLSGIIAGIVAGM 112

Query: 146 SFNRFYKIQLPEYLGFFAGKRAVPIITGFISIALGVVLSFIWPPIGSAIATFSDWAANQD 205
            +N++  I+LP+YL FF GKR VPI+TG   + LG+V  ++W PI  AI +   W     
Sbjct: 113 LYNKYKDIKLPDYLAFFGGKRFVPIVTGVACLVLGIVFGYVWAPIQGAIDSAGHWLTTAG 172

Query: 206 PVTAFGIYGIVERSLIPFGLHHIWNVPFFYQAGTCVNGAGETVNGIMTCFLTADDASRAA 265
            + AF ++G++ R L+  GLHHI N   ++  G+     G  V G +  F   D  +   
Sbjct: 173 AIGAF-VFGLLNRLLLVTGLHHILNSLAWFVFGSFTPPGGAAVTGDLHRFFAGDPTAGTF 231

Query: 266 GNGFGQLAGGYLFKMFGLPAAAFAIAHCAKPENRAKVMGIMASAALTSFLTGITEPIEFA 325
             GF      +   MFGLPAA  A+ H A  E RA V G++ S ALTSFLTG+TEPIEF+
Sbjct: 232 MTGF------FPIMMFGLPAACLAMFHEAPKEKRALVGGLLFSMALTSFLTGVTEPIEFS 285

Query: 326 FLFVAPVLYAIHAVLAGLAYVLTNALGVVHGHTFSNGFIDFVVQSPRADNMLLLVGLGIG 385
           F+F+APVLYAIHAVL GL+  + +ALG+  G TFS G ID+V+    +      + +GI 
Sbjct: 286 FMFLAPVLYAIHAVLTGLSLAICSALGIKLGFTFSAGAIDYVLNYGLSTKGWEAIPIGIA 345

Query: 386 YAVLYYVVFTFVIRALNLKTPGRE---DESADKSASSGNEL-------------AGDLVA 429
           Y V+YY +F F IR  N+ TPGRE    E+A +S +SG  +             A   +A
Sbjct: 346 YGVVYYGLFRFFIRKFNMATPGREAETPEAAVESYTSGGYVAPVEGATAAAGTRAQRYIA 405

Query: 430 AFGGKANITNLDACITRLRVSVADTALVDQDKLKKLGAAGVVMVSGG-VQAIFGTKSDNL 488
           A GG AN++ +DAC TRLR+SV D   V +++LK +GA GV+   GG VQ I G ++D +
Sbjct: 406 ALGGAANLSVVDACTTRLRLSVVDAEKVSENELKSIGARGVLKRGGGAVQVIIGPEADII 465

Query: 489 KTEMDEWIRNNG 500
             E+   I + G
Sbjct: 466 ADEIRSTIASGG 477