Pairwise Alignments

Query, 500 a.a., PTS glucose transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

Subject, 633 a.a., PTS N-acetyl glucosamine transporter subunit IIABC from Erwinia amylovora T8

 Score =  327 bits (838), Expect = 8e-94
 Identities = 190/471 (40%), Positives = 280/471 (59%), Gaps = 27/471 (5%)

Query: 36  VGKALMLPVSVLPVAGILLGVGAANFSWLPEVVSHLMEQAGGSVFGQMPLLFAVGVALGF 95
           +G++L LP++VLPVA ++L  G  +   +P +      Q GG++F  +PL+FA+GVA  +
Sbjct: 1   LGRSLQLPIAVLPVAALMLRFGQPDLLNMPFIA-----QGGGAIFDNLPLIFAIGVASTW 55

Query: 96  T-NNDGVSGLSAIVGYGIMVATLKVMATVMGVSGIDTGVLGGILAGGVAAWSFNRFYKIQ 154
           + +N G + L+  VGY IM    K M T+     ++ GVL GI+ G +A  ++NR+  I+
Sbjct: 56  SKDNAGAAALAGAVGYFIMT---KAMVTISPT--VNMGVLAGIVTGLIAGMTYNRWAGIK 110

Query: 155 LPEYLGFFAGKRAVPIITGFISIALGVVLSFIWPPIGSAIATFSDWAANQDPVTAFGIYG 214
           LP++L FF GKR VPI TGF  + L  V  ++WPP+ +AI    +W  ++    A GI+G
Sbjct: 111 LPDFLSFFGGKRFVPIATGFFCLLLAAVFGYVWPPVQAAIHAGGEWIVSEGAFGA-GIFG 169

Query: 215 IVERSLIPFGLHHIWNVPFFYQAGTCVNGAGETVNGIMTCFLTADDASRAAGNGFGQLAG 274
           +V R LIP GLH + N   ++Q G   N AG  V+G +  F   D  +    +GF     
Sbjct: 170 LVNRLLIPTGLHQVLNTIAWFQIGEFTNAAGAVVHGDINRFYAGDGTAGMFMSGF----- 224

Query: 275 GYLFKMFGLPAAAFAIAHCAKPENRAKVMGIMASAALTSFLTGITEPIEFAFLFVAPVLY 334
            +   MFGLP AA A+   A    R  V G++ S A+T+FLTG+TEP+EF F+F+AP LY
Sbjct: 225 -FPIMMFGLPGAALAMYLAAPKARRPMVGGMLLSVAVTAFLTGVTEPLEFLFMFLAPALY 283

Query: 335 AIHAVLAGLAYVLTNALGVVHGHTFSNGFIDFVV--QSPRAD-NMLLLVGLGIGYAVLYY 391
            IHA+L G++     ALG+  G +FS G ID+ +  + P A  N+ LL+ +G    V+Y+
Sbjct: 284 LIHALLTGISLFAATALGIHAGFSFSAGAIDYALMYKLPAASHNVWLLMVMGAVAFVIYF 343

Query: 392 VVFTFVIRALNLKTPGREDESADKSASSGNE-----LAGDLVAAFGGKANITNLDACITR 446
            +F+ VIR  NLKTPGRED    +  +S  E     L+   + A GG  N+  +DACITR
Sbjct: 344 TLFSAVIRMFNLKTPGREDAFEQQGGNSNTEEGLSQLSRQYIGAVGGSDNLNVIDACITR 403

Query: 447 LRVSVADTALVDQDKLKKLGAAGVVMVS-GGVQAIFGTKSDNLKTEMDEWI 496
           LR+SV D A VD    K+LGA+GVV ++   +Q I G K++++  EM + I
Sbjct: 404 LRLSVKDAARVDDAACKRLGASGVVKLNKQTIQVIVGAKAESIAEEMKKLI 454