Pairwise Alignments

Query, 500 a.a., PTS glucose transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

Subject, 538 a.a., PTS sugar transporter subunit IIB from Escherichia coli ECRC62

 Score =  216 bits (551), Expect = 1e-60
 Identities = 163/539 (30%), Positives = 254/539 (47%), Gaps = 85/539 (15%)

Query: 31  ANLQKVGKALMLPVSVLPVAGILLGVGAA--NFSWLPEVVS----------HLMEQAGGS 78
           + +Q+ G A+  PV + P AGI++G+     N  ++ E ++          H++E+ G +
Sbjct: 3   SQIQRFGGAMFTPVLLFPFAGIVVGLAILLQNPMFVGESLTDPNSLFAQIVHIIEEGGWT 62

Query: 79  VFGQMPLLFAVGVALGFTNN-DGVSGLSAIVGY-------------------------GI 112
           VF  MPL+FAVG+ +G      G + L+ +V +                          +
Sbjct: 63  VFRNMPLIFAVGLPIGLAKQAQGRACLAVMVSFLTWNYFINAMGMTWGSYFGVDFTQDAV 122

Query: 113 MVATLKVMATVMGVSGIDTGVLGGILAGGVAAWSFNRFYKIQLPEYLGFFAGKRAVPIIT 172
             + L +MA   G+  +DT ++G I+  G+     NR +  +LP +LG F G   V II 
Sbjct: 123 AGSGLTMMA---GIKTLDTSIIGAIIISGIVTALHNRLFDKKLPVFLGIFQGTSYVVIIA 179

Query: 173 GFISIALGVVLSFIWPPIGSAIATFSDWAANQDPVTAFGIYGIVERSLIPFGLHHIWNVP 232
             + I    +    WP +   I +   +  +   +  + +Y  +ER LIP GLHH     
Sbjct: 180 FLVMIPCAWLTLLGWPKVQMGIESLQAFLRSAGALGVW-VYTFLERILIPTGLHH----- 233

Query: 233 FFYQAGTCVNGAGETVNGIMTCF--------LTADDASRAAGNGFGQLAGGYLFKMFGLP 284
           F Y  G  + G      GI   +        L+A+        G   L G    K+FG  
Sbjct: 234 FIY--GQFIFGPAAVEGGIQMYWAQHLQEFSLSAEPLKSLFPEGGFALHGN--SKIFGAV 289

Query: 285 AAAFAIAHCAKPENRAKVMGIMASAALTSFLTGITEPIEFAFLFVAPVLYAIHAVLAGLA 344
             + A+   A PENR KV G++  A LT+ L GITEP+EF FLF++P+L+A+HAVLA   
Sbjct: 290 GISLAMYFTAAPENRVKVAGLLIPATLTAMLVGITEPLEFTFLFISPLLFAVHAVLAASM 349

Query: 345 YVLTNALGVVHGHTFSNGFIDFVVQ-------SPRADNMLLLVGLGIGYAVLYYVVFTFV 397
             +    GVV       G ID V+        S  AD ML  + +G+ + +LY+VVF  +
Sbjct: 350 STVMYLFGVV--GNMGGGLIDQVLPQNWIPMFSNHADMMLTQIAIGLCFTLLYFVVFRTL 407

Query: 398 IRALNLKTPGRED------ESADKSASSGNELAGD----------LVAAFGGKANITNLD 441
           I   N+ TPGRED        A+  AS G   A +          ++ A GG  NI++++
Sbjct: 408 ILQFNMCTPGREDAEVKLYSKAEYKASRGQTTAAEPKKELDQAAGILQALGGVGNISSIN 467

Query: 442 ACITRLRVSVAD-TALVDQDKLKKLGAAGVVMVSGGVQAIFGTKSDNLKTEMDEWIRNN 499
            C TRLR+++ D +  +D +  KKLGA GV      +Q I G     L+ ++D  I ++
Sbjct: 468 NCATRLRIALHDMSQTLDDEVFKKLGAHGVFRSGDAIQVIIGLHVSQLREQLDSLINSH 526