Pairwise Alignments

Query, 500 a.a., PTS glucose transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

Subject, 648 a.a., N-acetyl glucosamine specific PTS enzyme IIC, IIB, and IIA components from Escherichia coli BL21

 Score =  322 bits (824), Expect = 3e-92
 Identities = 184/479 (38%), Positives = 284/479 (59%), Gaps = 32/479 (6%)

Query: 28  NAFANLQKVGKALMLPVSVLPVAGILLGVGAANFSWLPEVVS-HLMEQAGGSVFGQMPLL 86
           N     Q++G+AL LP++VLPVA +LL  G       P++++   + QAGG++F  + L+
Sbjct: 2   NILGFFQRLGRALQLPIAVLPVAALLLRFGQ------PDLLNVAFIAQAGGAIFDNLALI 55

Query: 87  FAVGVALGFTNND-GVSGLSAIVGYGIMVATLKVMATVMGVSGIDTGVLGGILAGGVAAW 145
           FA+GVA  ++ +  G + L+  VGY ++    K M T+     I+ GVL GI+ G V   
Sbjct: 56  FAIGVASSWSKDSAGAAALAGAVGYFVLT---KAMVTIN--PEINMGVLAGIITGLVGGA 110

Query: 146 SFNRFYKIQLPEYLGFFAGKRAVPIITGFISIALGVVLSFIWPPIGSAIATFSDWAANQD 205
           ++NR+  I+LP++L FF GKR VPI TGF  + L  +  ++WPP+  AI    +W  +  
Sbjct: 111 AYNRWSDIKLPDFLSFFGGKRFVPIATGFFCLVLAAIFGYVWPPVQHAIHAGGEWIVSAG 170

Query: 206 PVTAFGIYGIVERSLIPFGLHHIWNVPFFYQAGTCVNGAGETVNGIMTCFLTADDASRAA 265
            + + GI+G + R LIP GLH + N   ++Q G   N AG   +G +  F   D  +   
Sbjct: 171 ALGS-GIFGFINRLLIPTGLHQVLNTIAWFQIGEFTNAAGTVFHGDINRFYAGDGTAGMF 229

Query: 266 GNGFGQLAGGYLFKMFGLPAAAFAIAHCAKPENRAKVMGIMASAALTSFLTGITEPIEFA 325
            +GF      +   MFGLP AA A+   A  E R  V G++ S A+T+FLTG+TEP+EF 
Sbjct: 230 MSGF------FPIMMFGLPGAALAMYFAAPKERRPMVGGMLLSVAVTAFLTGVTEPLEFL 283

Query: 326 FLFVAPVLYAIHAVLAGLAYVLTNALGVVHGHTFSNGFIDFVVQ---SPRADNMLLLVGL 382
           F+F+AP+LY +HA+L G++  +   LG+  G +FS G ID+ +       + N+ +L+ +
Sbjct: 284 FMFLAPLLYLLHALLTGISLFVATLLGIHAGFSFSAGAIDYALMYNLPAASQNVWMLLVM 343

Query: 383 GIGYAVLYYVVFTFVIRALNLKTPGRED-------ESADKSASSG-NELAGDLVAAFGGK 434
           G+ +  +Y+VVF+ VIR  NLKTPGRED       E A+ +   G  +LA + +AA GG 
Sbjct: 344 GVVFFAIYFVVFSLVIRMFNLKTPGREDKEDEIVTEEANSNTEEGLTQLATNYIAAVGGT 403

Query: 435 ANITNLDACITRLRVSVADTALVDQDKLKKLGAAGVVMVS-GGVQAIFGTKSDNLKTEM 492
            N+  +DACITRLR++V D+A V+    K+LGA+GVV ++   +Q I G K++++   M
Sbjct: 404 DNLKAIDACITRLRLTVVDSARVNDAMCKRLGASGVVKLNKQTIQVIVGAKAESIGDAM 462