Pairwise Alignments

Query, 486 a.a., sodium-dependent transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 466 a.a., Na+-dependent transporters of the SNF family from Kangiella aquimarina DSM 16071

 Score =  201 bits (511), Expect = 4e-56
 Identities = 146/483 (30%), Positives = 233/483 (48%), Gaps = 61/483 (12%)

Query: 3   REQWGSRVGFVLAAVGSAIGLGNIWRFPYMAYENGGGAFFIPYLFAMVTAGIPFMILEFS 62
           R Q+ +R+GF+LAA GSA+GLGNIW+FP+   E GG AF + YL        P M+ E +
Sbjct: 5   RGQFNTRIGFILAAAGSAVGLGNIWKFPFEVGEGGGAAFVVIYLAFCFLLCFPVMVSEIA 64

Query: 63  MGQKHRGSAPTTLAKI-HSKFEWLGWFQVGIAAVIAVYYVAVIGWAISYFGMSFTQSWG- 120
           +G+K   +      K+ H  +  +G+  V    +I  +Y  V GWA  YF      ++G 
Sbjct: 65  IGRKTNLNPVGAFKKLGHKNWAIIGFMGVLAGVLILSFYNVVAGWAFGYFLEMVQGNFGI 124

Query: 121 SDTNAYFFSEYLKLGDNSPTNLGSIQWHIAFAMLIAWVITYAAIVGGVKKGIERASKIMM 180
            +    F +++ K+G           + + F  + A++++      G+  GIERA+ I+M
Sbjct: 125 GEEFGSFITDWHKIG----------LYGLVFMAVTAFIVS-----RGIHDGIERAATILM 169

Query: 181 PILFIMVLILIARMIFLPGALDGVNYMFQPDFSKIWDVKVWAAAYGQIFFTLSIGFAIML 240
           P LF+M++ LI   + L GA  G+NY   PDFS+I    V+ +A GQ FF+LS+G   ++
Sbjct: 170 PTLFLMIVGLIIYAMTLDGAGVGINYYLVPDFSEITGEVVY-SALGQAFFSLSLGMGALI 228

Query: 241 AYSSYLPEKSDITNNAFMTVLINCGFSVLAGIMIFSVLGYMAQEQGKPLTEVVSAGVGLA 300
            Y SY+ +K DI  +A +  L +   + LAG+MIF  + Y+ Q       E V  G GL 
Sbjct: 229 TYGSYVSKKQDIVKSAALITLTDVSIAFLAGLMIFPFVAYLTQ----GTMEGVDGGAGLI 284

Query: 301 FVTLPAAINLL--PIPYILGPLFFLALVVAGLSSHISIMEAVTSALIDKLGWSRKKAANI 358
           F TLP         +  ++G LFFL L  A L+S +S++E   S L+D+    R  A   
Sbjct: 285 FATLPGVFESFGPTLGIVVGSLFFLLLCFAALTSTVSLLEVPVSYLVDEKKIKRPVAVWG 344

Query: 359 VIGIGFLVSMAFATNGG-------------------LLLLDLVDHFANNVGI-MASCLVE 398
           +  + FL+ +      G                   +  +D V+  A++  + +   L+ 
Sbjct: 345 MAALIFLIGIPSLLGNGSVDSLTQFVQMNKNAEWQYVTFMDFVEAIASDTFLPLGGALIS 404

Query: 399 LVLMTWLLKISDVRKYVNSISDFSVG---------VWFDICLRFVSPVILAII-VATKLQ 448
                    ++ V K  N  ++ ++G          + D  + F  PV+L II V T L 
Sbjct: 405 FF-------VAYVWKKHNLNAEIAIGREGGSQWVAKYIDFAITFFCPVVLGIITVVTILD 457

Query: 449 ALF 451
             F
Sbjct: 458 RFF 460