Pairwise Alignments

Query, 486 a.a., sodium-dependent transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., sodium-dependent transporter from Bacteroides stercoris CC31F

 Score =  220 bits (560), Expect = 9e-62
 Identities = 142/464 (30%), Positives = 241/464 (51%), Gaps = 35/464 (7%)

Query: 2   KREQWGSRVGFVLAAVGSAIGLGNIWRFPYMAYENGGGAFFIPYLFAMVTAGIPFMILEF 61
           +R  +GS++G +LA+ GSA+GLGNIWRFP+    +GG AF + YL  ++  GIP MI EF
Sbjct: 5   ERANFGSKLGVILASAGSAVGLGNIWRFPFETGNHGGAAFILIYLVCVLILGIPIMIAEF 64

Query: 62  SMGQKHRGSAPTTLAKI--HSKFEWLGWFQVGIAAVIAVYYVAVIGWAISYFGMSFTQSW 119
            +G++ R +      K+   + + W+G   V    +I  YY  V GW + + G + T S+
Sbjct: 65  LIGRRSRANTAGAYQKLAPGTHWRWVGRMGVLAGFLILGYYSVVAGWTLEFIGEAATNSF 124

Query: 120 GSDTNAYFFSEYLKLGDNSPTNLGSIQWHIAFAMLIAWVITYAAIVGGVKKGIERASKIM 179
              + A F + +            S  W     +++  + T+  I+ GV+KGIE+++KIM
Sbjct: 125 AGKSAAEFIASF--------NGFVSNPWRPVIWLVVFLLATHFIIIKGVEKGIEKSAKIM 176

Query: 180 MPILFIMVLILIARMIFLPGALDGVNYMFQPDFSKIWDVKVWAAAYGQIFFTLSIGFAIM 239
           MP+LFI++++L    + LPGA  G+ ++ +PDFSK+ D  V+  A GQ FF+LS+G   +
Sbjct: 177 MPMLFILLVVLAICSVSLPGASAGIEFLLKPDFSKV-DGNVFLGAMGQAFFSLSLGMGCL 235

Query: 240 LAYSSYLPEKSDITNNAFMTVLINCGFSVLAGIMIFSVLGYMAQEQGKPLTEVVSAGVGL 299
             Y+SY    +++   A     I+   ++LAG +IF     +  +          AG  L
Sbjct: 236 CTYASYFRNDTNLPKTALNVAGIDTLVAILAGFIIFPAAFSVGIQP--------DAGPSL 287

Query: 300 AFVTLP-----AAINLLPIPYILGPLFFLALVVAGLSSHISIMEAVTSALIDKLGWSRKK 354
            F+TLP     A  N+  +   L  +F++ L +A L+S IS+ E VT+ L ++  ++R K
Sbjct: 288 LFITLPNVFQQAFGNIPWLAIALSIMFYVLLALAALTSTISLHEVVTAYLHEEFKFTRGK 347

Query: 355 AANIV----IGIGFLVSMAFA-----TNGGLLLLDLVDHFANNVGIMASCLVELVLMTWL 405
           AA +V    I +G L S++       T  GL L DL D     + +        +   W 
Sbjct: 348 AAKLVTAGCIVLGVLCSLSLGVGKSYTIFGLNLFDLFDFVTAKIMLPLGGFFISIFTGWY 407

Query: 406 LKISDVRKYVNSISDFSVGVW--FDICLRFVSPVILAIIVATKL 447
           L    V + V++    ++ ++      L++++P+ + +I   +L
Sbjct: 408 LDKKIVWEEVSNNGTLNIHIYRLLIFILKYIAPIGIGLIFINEL 451