Pairwise Alignments

Query, 486 a.a., sodium-dependent transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., Sodium:neurotransmitter symporter family protein from Bacteroides ovatus ATCC 8483

 Score =  239 bits (609), Expect = 2e-67
 Identities = 154/463 (33%), Positives = 247/463 (53%), Gaps = 35/463 (7%)

Query: 3   REQWGSRVGFVLAAVGSAIGLGNIWRFPYMAYENGGGAFFIPYLFAMVTAGIPFMILEFS 62
           R  +GS++G +LA+ GSA+GLGNIWRFPY    +GG AF + YL  ++  G+P MI EF 
Sbjct: 6   RANFGSKLGVILASAGSAVGLGNIWRFPYETGNHGGAAFILIYLGCILLLGLPIMIAEFL 65

Query: 63  MGQKHRGSAPTTLAKI--HSKFEWLGWFQVGIAAVIAVYYVAVIGWAISYFGMSFTQSWG 120
           +G++ R +      K+   + + W+G   V    +I  YY  V GW + Y   + T  + 
Sbjct: 66  IGRRSRANTARAYQKLAPGTHWRWVGRMGVLAGFLILSYYAVVAGWTLEYIFEAATNGFA 125

Query: 121 SDTNAYFFSEYLKLGDNSPTNLGSIQWHIAFAMLIAWVITYAAIVGGVKKGIERASKIMM 180
             T+  F S + +   +SP     + W +AF +     IT+  IV GV+KGIE++SKIMM
Sbjct: 126 GKTSGEFISSFQQF-SSSPWR--PVVWLVAFLL-----ITHFIIVKGVEKGIEKSSKIMM 177

Query: 181 PILFIMVLILIARMIFLPGALDGVNYMFQPDFSKIWDVKVWAAAYGQIFFTLSIGFAIML 240
           P LFI++LIL+   + LPGA  G+ ++ +PDFSK+ D  V+ +A GQ FF+LS+G   + 
Sbjct: 178 PTLFIIILILVVCSVTLPGAGAGIEFLLKPDFSKV-DGNVFLSAMGQAFFSLSLGMGCLC 236

Query: 241 AYSSYLPEKSDITNNAFMTVLINCGFSVLAGIMIFSVLGYMAQEQGKPLTEVVSAGVGLA 300
            Y+SY  +++++T  AF   +I+   ++LAG +IF     +  +          +G  L 
Sbjct: 237 TYASYFSKETNLTKTAFSVGIIDTFVAILAGFIIFPAAFSVGIQP--------DSGPSLI 288

Query: 301 FVTLP----AAINLLPI-PYILGPLFFLALVVAGLSSHISIMEAVTSALIDKLGWSRKKA 355
           F+TLP     A + +PI  YI   +F+  L +A L+S IS+ E VT+ L ++   SR KA
Sbjct: 289 FITLPNVFQQAFSGVPILAYIFSVMFYALLAMAALTSTISLHEVVTAYLHEEFNLSRGKA 348

Query: 356 ANIVIG----IGFLVSMAFA-----TNGGLLLLDLVDHFANNVGIMASCLVELVLMTWLL 406
           A +V G    +G   S++       T  GL + DL D     + +    L   +   W L
Sbjct: 349 ARLVTGGCVFLGIFCSLSLGVMKGFTVFGLGMFDLFDFVTAKIMLPLGGLCISLFTGWYL 408

Query: 407 KISDVRKYVNSISDFSVGVW--FDICLRFVSPVILAIIVATKL 447
               V   + +     V V+      L++++P+ +++I   +L
Sbjct: 409 DKKIVWSEITNDGSLKVPVYKLIIFILKYMAPIAISLIFINEL 451