Pairwise Alignments

Query, 486 a.a., sodium-dependent transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 492 a.a., hypothetical protein from Acinetobacter radioresistens SK82

 Score =  414 bits (1064), Expect = e-120
 Identities = 202/489 (41%), Positives = 315/489 (64%), Gaps = 9/489 (1%)

Query: 3   REQWGSRVGFVLAAVGSAIGLGNIWRFPYMAYENGGGAFFIPYLFAMVTAGIPFMILEFS 62
           RE W +R GF++AA+GSA+GLGNIWRFPY+AYENGGGAF IPYL A++TAG+P + L+++
Sbjct: 5   RENWSARSGFIIAAIGSAVGLGNIWRFPYVAYENGGGAFLIPYLIALLTAGLPLLFLDYA 64

Query: 63  MGQKHRGSAPTTLAKIHSKFEWLGWFQVGIAAVIAVYYVAVIGWAISYFGMSFTQSWGSD 122
           +G +  G+ P    K+    E LGW+QV +  +IA+YY  V+ WA SY   S  Q WG+D
Sbjct: 65  VGHRSNGAPPKAYKKLFKPAESLGWWQVCVCIIIALYYAGVLTWAGSYIFFSMGQIWGND 124

Query: 123 TNAYFFSEYLKLGDNSPTNLGSIQWHIAFAMLIAWVITYAAIVGGVKKGIERASKIMMPI 182
             A+FF  +L+  + S  ++  +  H+ + ++  W +  A + GGVKKG+E +++I MP+
Sbjct: 125 PEAFFFKTFLRTSEASNFDMSFVS-HLFWPLVGVWALVLAILYGGVKKGVELSNRIFMPL 183

Query: 183 LFIMVLILIARMIFLPGALDGVNYMFQPDFSKIWDVKVWAAAYGQIFFTLSIGFAIMLAY 242
           L ++  IL+ + + LPGA DG+N  F P++  + D KVW AAYG IFF+LS+GF IM+ Y
Sbjct: 184 LVVLFTILVIQALRLPGAADGLNAFFTPNWKAMMDYKVWLAAYGHIFFSLSVGFGIMVTY 243

Query: 243 SSYLPEKSDITNNAFMTVLINCGFSVLAGIMIFSVLGYMAQEQGKPLTEVVSAGVGLAFV 302
           +SYL  K+++T +  +    N  F +LAGI +F+ LG+MA   G  + EVVS G+GLAF+
Sbjct: 244 ASYLKPKTNLTGSGLIVGFANSSFELLAGIGVFAALGFMAHSAGTSVQEVVSGGIGLAFI 303

Query: 303 TLPAAINLLPI-PYILGPLFFLALVVAGLSSHISIMEAVTSALIDKLGWSRKKAANIV-I 360
             P  I+ L     + G LFF +L VAG++S +SI+E   +A+ DKL WSRKKA +++  
Sbjct: 304 AFPKLISSLGAGADLFGILFFGSLFVAGVTSMVSILEVPIAAMQDKLNWSRKKAVSVIGF 363

Query: 361 GIGFLVSMAFATNGGLLLLDLVDHFANNVGIMASCLVELVLMTWLLKI--SDVRKYVNSI 418
             G +    F++   + L+D++DHF NN+GI++  LV +++++W  ++  +++  ++NSI
Sbjct: 364 STGAVSIFLFSSVNAIKLVDIIDHFINNLGIVSGALVSIIIVSWFKRVLMTELEIHINSI 423

Query: 419 SDFSVGVWFDICLRFVSPVILAIIVATKLQALFTEGYGGYDLTL----GWAIIAALLVIG 474
           S   +G  +++ L  V+PV+L   +A  L AL  +GYG Y L+L    GW  I    +  
Sbjct: 424 STVKLGRTWELTLTVVTPVVLLSTLALTLNALLQKGYGDYSLSLQVWFGWGSIIFCALGA 483

Query: 475 ILINASSRK 483
           +L    S++
Sbjct: 484 LLFTKLSQR 492