Pairwise Alignments

Query, 405 a.a., ROK family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 404 a.a., N-acetylglucosamine repressor from Vibrio cholerae E7946 ATCC 55056

 Score =  367 bits (942), Expect = e-106
 Identities = 184/400 (46%), Positives = 275/400 (68%), Gaps = 1/400 (0%)

Query: 5   QPGHIDHIKQINAGRVYKLIDQKGPISRIDLSKESELAPASITKITRELIDAHLIHETTV 64
           Q G++D +KQ+N+  VY+LIDQ+GPISRI ++  S+LAPAS+TKITR+L++  LI E   
Sbjct: 5   QIGNVDLVKQLNSAAVYRLIDQQGPISRIQVADVSQLAPASVTKITRQLLERGLIKEVA- 63

Query: 65  QEAISRGRPAVGLQTNNLGWQFLSMRLGRGYLTIALHELGGEVLIDTKIDIHEIDQDDVL 124
           Q+A + GR A+ L T    +  +++R+GR Y+ ++L++LGG  L+D   + H   QD ++
Sbjct: 64  QQASTGGRRAISLTTEVKPFHSIAVRIGRDYIQLSLYDLGGNSLVDEHHEFHYNTQDVLM 123

Query: 125 ARLLFEIEEFFQTYAAQLDRVTSIAITLPGLVNSEQGIVLQMPHYNVKNLALGPEIYKAT 184
           + L+ +I++F Q + A +D++ +I + LPGLVN E G+V  MP+  +  L LG  I    
Sbjct: 124 SSLIKQIKQFIQQHTALIDQLIAIGVALPGLVNPETGVVEYMPNVAINELPLGATIRDEF 183

Query: 185 GLPVFVANDTRAWALAEKLFGHSQDVDNSVLISIHHGLGAGIVLDGRVLQGRHGNIGELG 244
            +  FV ND R  ALAE  FG SQD  +S+L+S+H G GAGI+++G+V  G + N+GE+G
Sbjct: 184 HVECFVGNDVRGIALAEHYFGASQDCQDSILVSVHRGTGAGIIVNGQVFLGYNRNVGEIG 243

Query: 245 HIQIDPQGKRCHCGNYGCLETVASSQAIRDQVTARIQAGEPSCLATVEEISIEDICAAAA 304
           HIQIDP G++C CGN+GCLETVA++ AI  +V   I  G  S L+T++ I+I+D+C  A 
Sbjct: 244 HIQIDPLGEQCQCGNFGCLETVATNPAITSRVQKLIAQGYESSLSTLDTITIDDVCEHAN 303

Query: 305 DGDPLAVDVIQQLGRYLGAAIAIVINLFNPEKILIGGVINQAKSILYPSIEQCIREQSLP 364
            GD LA   + ++G  LG AIAI +NLFNP+KI+I G I  AK I++P+I++ +  QSL 
Sbjct: 304 AGDELAKQALVRVGNQLGKAIAITVNLFNPQKIVIAGQITAAKEIVFPAIQRNVENQSLK 363

Query: 365 VYHQDLKLVESRFYKQATMPGAALIKQALYDGLLLMKVVE 404
            +HQ L +V S+ YKQ TM   A+IK+A+ +G+LL K++E
Sbjct: 364 TFHQHLPIVSSQVYKQPTMGAFAMIKRAMLNGVLLQKLLE 403