Pairwise Alignments

Query, 405 a.a., ROK family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., putative NAGC-like transcriptional regulator (VIMSS) from Escherichia coli BW25113

 Score = 86.3 bits (212), Expect = 1e-21
 Identities = 67/249 (26%), Positives = 112/249 (44%), Gaps = 25/249 (10%)

Query: 148 IAITLPGLVNSEQGIVLQMPHYNVKNLALGP---EIYKATGLPVFVANDTRA--WALAEK 202
           +AI   G++    G +L +  +N+  L   P    + + T LP    ND +A  WA  + 
Sbjct: 59  VAIASTGIIRD--GSLLALNPHNLGGLLHFPLVKTLEQLTNLPTIAINDAQAAAWAEFQA 116

Query: 203 LFGHSQDVDNSVLISIHHGLGAGIVLDGRVLQGRHGNIGELGHIQIDPQGKRCHCGNYGC 262
           L G   D+ + V I++  G+G G+V   ++L G  G  G +GH   DP G  C CG  GC
Sbjct: 117 LDG---DITDMVFITVSTGVGGGVVSGCKLLTGPGGLAGHIGHTLADPHGPVCGCGRTGC 173

Query: 263 LETVASSQAIRDQVTARIQAGEPSCLATVEEISIEDICAAAADGDPLAVDVIQQLGRYLG 322
           +E +AS + I       +   +   + T            A  GD  A  +I +  R L 
Sbjct: 174 VEAIASGRGIAAAAQGELAGADAKTIFT-----------RAGQGDEQAQQLIHRSARTLA 222

Query: 323 AAIAIVINLFNPEKILIGGVINQAKSILYPSIEQCIREQSLPVYHQDLKLVESRFYKQAT 382
             IA +    + + +++GG +  A+   Y ++ +    Q    +H D  L+ + +   A 
Sbjct: 223 RLIADIKATTDCQCVVVGGSVGLAEG--YLALVETYLAQEPAAFHVD--LLAAHYRHDAG 278

Query: 383 MPGAALIKQ 391
           + GAAL+ Q
Sbjct: 279 LLGAALLAQ 287