Pairwise Alignments

Query, 405 a.a., ROK family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 397 a.a., putative NAGC-like transcriptional regulator (VIMSS) from Escherichia coli BW25113

 Score = 94.0 bits (232), Expect = 7e-24
 Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 13/222 (5%)

Query: 127 LLFEIEEFFQTYAAQL-DRVTSIAITLPGLVNSEQGIVLQMPH------YNVKNLALGPE 179
           LL EIE+ +  +     D   ++A+ + G V+   G+   MP         VK L     
Sbjct: 121 LLSEIEKCWHRHRKLWPDHTINLALAIHGQVDPVTGVSQTMPQAPWTTPVEVKYL----- 175

Query: 180 IYKATGLPVFVANDTRAWALAEKLFGHSQDVDNSVLISIHHGLGAGIVLDGRVLQGRHGN 239
           + +  G+ V V ND    ALAEK   +SQ+ D  V I++ +G+G+  V++ ++ +G    
Sbjct: 176 LEEKLGIRVMVDNDCVMLALAEKWQNNSQERDFCV-INVDYGIGSSFVINEQIYRGSLYG 234

Query: 240 IGELGHIQIDPQGKRCHCGNYGCLETVASSQAIRDQVTARIQAGEPSCLATVEEISIEDI 299
            G++GH  ++P G  C CG YGCLETVAS  A++ Q    +++   S     E+++   +
Sbjct: 235 SGQIGHTIVNPDGVVCDCGRYGCLETVASLSALKKQARVWLKSQPVSTQLDPEKLTTAQL 294

Query: 300 CAAAADGDPLAVDVIQQLGRYLGAAIAIVINLFNPEKILIGG 341
            AA   G+P     + +    +G ++   +N+ N  +I + G
Sbjct: 295 IAAWQSGEPWITSWVDRSANAIGLSLYNFLNILNINQIWLYG 336