Pairwise Alignments

Query, 405 a.a., ROK family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., possible NAGC-like transcriptional regulator (VIMSS) from Escherichia coli BW25113

 Score = 66.2 bits (160), Expect = 1e-15
 Identities = 52/223 (23%), Positives = 97/223 (43%), Gaps = 20/223 (8%)

Query: 147 SIAITLPGLVNSEQGIVLQMPHYNVKNLALGPEIYKATGLPVFVANDTRAWALAEKLFGH 206
           ++ + +PG ++   G+V       +       ++       V +AND    A++E + G 
Sbjct: 59  TVGMGIPGSISPYTGVVKNANSTWLNGQPFDKDLSARLQREVRLANDANCLAVSEAVDGA 118

Query: 207 SQDVDNSVLISIHHGLGAGIVLDGRVLQGRHGNIGELGHIQI---DPQGKR------CHC 257
           +        + I  G GAG+  +GR   G +G  GE GH  +   D    R      C+C
Sbjct: 119 AAGAQTVFAVIIGTGCGAGVAFNGRAHIGGNGTAGEWGHNPLPWMDEDELRYREEVPCYC 178

Query: 258 GNYGCLETVASSQAIRDQVTARIQAGEPSCLATVEEISIEDICAAAADGDPLAVDVIQQL 317
           G  GC+ET  S       +  R  +G          +   +I     + DP+A   +++ 
Sbjct: 179 GKQGCIETFISGTGF--AMDYRRLSG--------HALKGSEIIRLVEESDPVAELALRRY 228

Query: 318 GRYLGAAIAIVINLFNPEKILIGGVINQAKSILYPSIEQCIRE 360
              L  ++A V+N+ +P+ I++GG ++     LY ++ Q I++
Sbjct: 229 ELRLAKSLAHVVNILDPDVIVLGGGMSNVDR-LYQTVGQLIKQ 270