Pairwise Alignments

Query, 405 a.a., ROK family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 406 a.a., DNA-binding transcriptional repressor Mlc from Escherichia coli ECRC62

 Score =  381 bits (978), Expect = e-110
 Identities = 183/402 (45%), Positives = 281/402 (69%), Gaps = 2/402 (0%)

Query: 5   QPGHIDHIKQINAGRVYKLIDQKGPISRIDLSKESELAPASITKITRELIDAHLIHETTV 64
           QPGHID IKQ NAG VY+LIDQ GP+SRIDLS+ ++LAPASITKI RE+++AHL+ E  +
Sbjct: 6   QPGHIDQIKQTNAGAVYRLIDQLGPVSRIDLSRLAQLAPASITKIVREMLEAHLVQELEI 65

Query: 65  QEAISRGRPAVGLQTNNLGWQFLSMRLGRGYLTIALHELGGEVLIDTKIDIHEIDQDDVL 124
           +EA +RGRPAVGL      W +LS+R+ RG + +AL +L  +++++   ++   D   +L
Sbjct: 66  KEAGNRGRPAVGLVVETEAWHYLSLRISRGEIFLALRDLSSKLVVEESQELALKDDSPLL 125

Query: 125 ARLLFEIEEFFQTYAAQLDRVTSIAITLPGLVNSEQGIVLQMPHY-NVKNLALGPEIYKA 183
            R++  I++FF  +  +L+R+TSIAITLPG++++E GIV +MP Y +VK + LG  + + 
Sbjct: 126 DRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTENGIVHRMPFYEDVKEMPLGEALEQH 185

Query: 184 TGLPVFVANDTRAWALAEKLFGHSQDVDNSVLISIHHGLGAGIVLDGRVLQGRHGNIGEL 243
           TG+PV++ +D  AW +AE LFG S+   + + + I H +GAG++ DG +L     ++ E+
Sbjct: 186 TGVPVYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITDGHLLHAGSSSLVEI 245

Query: 244 GHIQIDPQGKRCHCGNYGCLETVASSQAIRDQVTARIQAGEPSCLATVEEISIEDICAAA 303
           GH Q+DP GKRC+CGN+GCLET+AS  +I +    R+     S L   + ++++ +C AA
Sbjct: 246 GHTQVDPYGKRCYCGNHGCLETIASVDSILELAQLRLNQSMSSMLHG-QPLTVDSLCQAA 304

Query: 304 ADGDPLAVDVIQQLGRYLGAAIAIVINLFNPEKILIGGVINQAKSILYPSIEQCIREQSL 363
             GD LA D+I  +G ++G  +AI++NLFNP+KILIG  +++A  IL+P I   IR+Q+L
Sbjct: 305 LRGDLLAKDIITGVGAHVGRILAIMVNLFNPQKILIGSPLSKAADILFPVISDSIRQQAL 364

Query: 364 PVYHQDLKLVESRFYKQATMPGAALIKQALYDGLLLMKVVEG 405
           P Y Q + +  ++F  Q TM GAAL+K A+Y+G LL+++++G
Sbjct: 365 PAYSQHISVESTQFSNQGTMAGAALVKDAMYNGSLLIRLLQG 406