Pairwise Alignments

Query, 405 a.a., ROK family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 408 a.a., ROK family transcriptional regulator from Agrobacterium fabrum C58

 Score =  112 bits (279), Expect = 3e-29
 Identities = 82/349 (23%), Positives = 157/349 (44%), Gaps = 42/349 (12%)

Query: 13  KQINAGRVYKLIDQKGPISRIDLSKESELAPASITKITRELIDAHLIHETTVQEAISRGR 72
           ++ N   V  L+ + G + R  ++K + L   ++  I  EL+   L+ E   +    RG+
Sbjct: 21  REHNRRVVLDLVRRHGSLGRAQIAKITHLTAQAVANIVDELVGEELLKELG-RRRTGRGQ 79

Query: 73  PAVGLQTNNLGWQFLSMRLGRGYLTIALHELGGEVLIDTKIDIHEIDQDDVLARLLFEIE 132
           P +    N  G   + + +   ++     +L G +       + +   + +L        
Sbjct: 80  PPIQFAVNPDGGATIGVEIAADHMVTVGLDLAGVLRTHRVTPLKDTTPEAIL-------- 131

Query: 133 EFFQTYAAQLDRVT-SIAITLPGLVNSEQGIVLQMPHYNVKNLALGPE------------ 179
              +T+AA+   V  ++   L G      G+V+  P       ++GP             
Sbjct: 132 ---KTFAAEHAAVAKNVGCRLLGT-----GVVMPGPFEIDGMTSVGPTTLSGWVGIDARQ 183

Query: 180 -IYKATGLPVFVANDTRAWALAEKLFGHSQDVDNSVLISIHHGLGAGIVLDGRVLQGRHG 238
            + +A G  V V ND  A A+ E+LFG    + N  +I    G+G GI+ DG   +G  G
Sbjct: 184 MLSEACGQQVVVENDATAAAVGERLFGAGLAIPNFCMIYFGVGIGLGIIQDGAPYRGAFG 243

Query: 239 NIGELGHIQIDPQGKRC-HCGNYGCLETVASSQAIRDQVTARIQAGEPSCLATVEEISIE 297
           N GE+GH+ + P+G+ C  CG  GCLE  AS+  +++++              V +  ++
Sbjct: 244 NAGEIGHVTVSPKGRLCPSCGQRGCLEAYASAYVLKEKLRH----------VGVADTELD 293

Query: 298 DICAAAADGDPLAVDVIQQLGRYLGAAIAIVINLFNPEKILIGGVINQA 346
           D+ A    G P+ ++ I +   +L   +A++ N+ +P+ +++GG + +A
Sbjct: 294 DLEALFKAGHPVVMEWIDEAAAHLAPMVAMLENILDPQTVILGGALPEA 342