Pairwise Alignments

Query, 405 a.a., ROK family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 399 a.a., ROK family transcriptional regulator from Agrobacterium fabrum C58

 Score = 96.7 bits (239), Expect = 1e-24
 Identities = 80/336 (23%), Positives = 149/336 (44%), Gaps = 16/336 (4%)

Query: 12  IKQINAGRVYKLIDQKGPISRIDLSKESELAPASITKITRELIDAHLI---HETTVQEAI 68
           ++ IN   V   I + GPISR+++S+ ++L+  +++ IT  L+D  LI   H   ++   
Sbjct: 9   MRAINRLSVLDSIRRHGPISRVEISERTQLSTTTVSAITASLLDDGLILTRHIGDIRTEG 68

Query: 69  SRGRPAVGLQTNNLGWQFLSMRLGRGYLTIALHELGGEVLIDTKIDIHEIDQD-DVLARL 127
           +RGRP V L+ N    + +  ++    +   + +  G VL    + I    Q   V+A L
Sbjct: 69  ARGRPRVMLELNPDAARVVGAKIAANRMVFVVTDFCGNVLSTLALPIRVDRQPIGVIADL 128

Query: 128 LFE-IEEFFQTYAAQLDRVTSIAITLPGLVNSEQGIVLQMPHYNVKNLALGPEIYKATGL 186
           + + +          L+ V  + + LPG++    G +   P     N+    E+      
Sbjct: 129 VEDGVRRCVVDAGLSLEDVDMVCLGLPGVIEHRTGRIRSSPILREVNVNFAEEMTARLNS 188

Query: 187 PVFVANDTRAWALAEKLFGHSQDVDNSVLISIHHGLGAGIVLDGRVLQGRHGNIGELGHI 246
           P  + +D  A  LA   FGH++D+++ VLIS+   LG G++   ++ +G  G    LG +
Sbjct: 189 PTIIESDAHAITLAHHWFGHARDLEDMVLISLEQTLGLGVLHQNQLFRGAGGLSHNLGDL 248

Query: 247 QIDPQGK-RCHCGNYGCLETVASSQAIRDQVTARIQAGEPSCLATVEEISIEDICAAAAD 305
            I    +      +      +  S+ +  +    I+ G          +       AA D
Sbjct: 249 VIGLANEGTVRLASQAGENAILGSRPVDGRFAEAIRLG--------RGMQHAHALIAAED 300

Query: 306 GDPLAVDVIQQLGRYLGAAIAIVINLFNPEKILIGG 341
            D +A  +  + G  LG  +A ++ LF P +++I G
Sbjct: 301 HDLIAAAL--RAGAALGLTLANIVTLFAPPRVIITG 334