Pairwise Alignments

Query, 314 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., chemotaxis protein CheW from Pseudomonas simiae WCS417

 Score =  297 bits (761), Expect = 2e-85
 Identities = 162/311 (52%), Positives = 211/311 (67%), Gaps = 7/311 (2%)

Query: 1   MSGVLNTVDQRTNLVGENRLELLLFSLNSRQIFAINVFKVREVIKVPLLTKMPGSHPHIT 60
           M+GV+++V+QRT LVG+NRLELLLF L+ +Q++ INVFKVREV++ P LT MP S P + 
Sbjct: 1   MAGVMDSVNQRTQLVGQNRLELLLFRLDGKQLYGINVFKVREVLQCPKLTIMPKSSPVVC 60

Query: 61  GVASLRGEPVPVIDLRSAIGFPPRRVQDTEQN-LIITEYNRTIQGFLVGQVRNIINTAWT 119
           GVA++RG  +P++DL  A G     +QD E   +IITEYN   QGFLV  V  I+N  W 
Sbjct: 61  GVANIRGATIPILDLALATG--SAGLQDRESPFVIITEYNTKTQGFLVRSVERIVNMNWE 118

Query: 120 EIQPPPKSAGRANYLTAFTHVKEQDKTHIVEIIDVEKVLAEIVHYDASISKEVLDESLLN 179
           EI PPPK  GR +YLTA T V  Q    +VEIIDVEK+LAE+     +IS  V+D    +
Sbjct: 119 EIHPPPKGTGRDHYLTAVTRVDNQ----LVEIIDVEKILAEVAPTSETISVGVVDAETAH 174

Query: 180 HMDGRTILIVDDSSTARNQVKDTLSQLGLNIIECHDGLQALNLLKSWCDEGKDIYSELLM 239
                 +L VDDSS AR QV   L  +G+ ++  +DG QAL+ L+   D+GK    E LM
Sbjct: 175 KAVSLRVLTVDDSSVARKQVTRCLQTVGVEVVALNDGRQALDYLRKLVDDGKKPEEEFLM 234

Query: 240 MITDAEMPEMDGYKLTYEIRNDPRMKDLFITLNTSLSGSFNEAMVQKVGCNRFISKFQPD 299
           MI+D EMPEMDGY LT EIRNDPRM+ L I L+TSLSG FN+AMV+KVG + F++KF+PD
Sbjct: 235 MISDIEMPEMDGYTLTAEIRNDPRMQKLHIILHTSLSGVFNQAMVKKVGADDFLAKFRPD 294

Query: 300 LLVQVAQERLR 310
            L     +R++
Sbjct: 295 DLASRVVDRIK 305