Pairwise Alignments

Query, 314 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., chemotaxis protein CheW from Pseudomonas simiae WCS417

 Score =  358 bits (919), Expect = e-104
 Identities = 180/309 (58%), Positives = 237/309 (76%), Gaps = 5/309 (1%)

Query: 1   MSGVLNTVDQRTNLVGENRLELLLFSLNSRQIFAINVFKVREVIKVPLLTKMPGSHPHIT 60
           M+G+L+TVDQRT LVGENRLE+L+F L  RQ+FAINVFKV+EV+++P LT MP  HP + 
Sbjct: 1   MAGILDTVDQRTQLVGENRLEILMFRLFGRQLFAINVFKVQEVLQLPKLTLMPQRHPFVC 60

Query: 61  GVASLRGEPVPVIDLRSAIGFPPRRVQDTEQNLIITEYNRTIQGFLVGQVRNIINTAWTE 120
           GV +LRG+ +PVIDL  AIG  P  V      +I+TEYNR++Q FLVG V  I+N  W  
Sbjct: 61  GVVNLRGQTLPVIDLSQAIGMRPL-VPGPNSTIIVTEYNRSVQAFLVGGVDRIVNMNWEA 119

Query: 121 IQPPPKSAGRANYLTAFTHVKEQDKTHIVEIIDVEKVLAEIVHYDASISKEVLDESLLNH 180
           I PPP SAGR +YLTA + V +Q    +VEIIDVEKVLAEIV Y+A +S+E L++ +L  
Sbjct: 120 ILPPPTSAGRQHYLTAISKVDDQ----LVEIIDVEKVLAEIVPYNAKVSREKLEDPVLER 175

Query: 181 MDGRTILIVDDSSTARNQVKDTLSQLGLNIIECHDGLQALNLLKSWCDEGKDIYSELLMM 240
             GR +L+VDDS+ A +Q++DTL QLG+ +    DGL+ALN+LK+W D G+ +  +LLM+
Sbjct: 176 ARGREVLLVDDSNVALSQLRDTLGQLGVKMHIASDGLKALNMLKAWADSGQVMTDKLLMI 235

Query: 241 ITDAEMPEMDGYKLTYEIRNDPRMKDLFITLNTSLSGSFNEAMVQKVGCNRFISKFQPDL 300
            TDAEMPEMDGY+LT EIRNDPR++ L++ L+TSLSGSFN++MV+KVGC+ F+SKFQPD 
Sbjct: 236 FTDAEMPEMDGYRLTTEIRNDPRLRGLYVVLHTSLSGSFNDSMVKKVGCDNFLSKFQPDK 295

Query: 301 LVQVAQERL 309
           LV V ++RL
Sbjct: 296 LVDVVRQRL 304