Pairwise Alignments

Query, 314 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., putative chemotaxis protein from Pseudomonas putida KT2440

 Score =  307 bits (787), Expect = 2e-88
 Identities = 162/310 (52%), Positives = 211/310 (68%), Gaps = 4/310 (1%)

Query: 1   MSGVLNTVDQRTNLVGENRLELLLFSLNSRQIFAINVFKVREVIKVPLLTKMPGSHPHIT 60
           M+GV+++V+QRT LVG+NRLELLLF LN  Q++ INVFKVREV++ P LT +P +HP + 
Sbjct: 1   MAGVMDSVNQRTQLVGQNRLELLLFRLNGEQLYGINVFKVREVLQCPALTLLPKAHPVVR 60

Query: 61  GVASLRGEPVPVIDLRSAIGFPPRRVQDTEQNLIITEYNRTIQGFLVGQVRNIINTAWTE 120
           GVA++RG  +P++DL  A G  P +       +IITEYN   QGFLV  V  I+N  W E
Sbjct: 61  GVANIRGATIPILDLSMATGLRPLQEDTRNSFVIITEYNTKTQGFLVHSVERIVNMNWEE 120

Query: 121 IQPPPKSAGRANYLTAFTHVKEQDKTHIVEIIDVEKVLAEIVHYDASISKEVLDESLLNH 180
           I PPPK  GR +YLTA T V  +    +VEIIDVEKVLAE+     S+S  V+D  + + 
Sbjct: 121 IHPPPKGTGRDHYLTAVTRVDNR----MVEIIDVEKVLAEVSPSSESVSAGVIDAEVQDK 176

Query: 181 MDGRTILIVDDSSTARNQVKDTLSQLGLNIIECHDGLQALNLLKSWCDEGKDIYSELLMM 240
                +L VDDSS AR QV   L  +G+ ++  +DG QALN L+   DEGK    E LMM
Sbjct: 177 AVLMRVLTVDDSSVARKQVSRCLQTVGVEVVALNDGRQALNYLRQLVDEGKKPEEEFLMM 236

Query: 241 ITDAEMPEMDGYKLTYEIRNDPRMKDLFITLNTSLSGSFNEAMVQKVGCNRFISKFQPDL 300
           I+D EMPEMDGY LT EIR+DPRM+ L I L+TSLSG FN+AMV+KVG + F++KF+PD 
Sbjct: 237 ISDIEMPEMDGYTLTAEIRSDPRMQKLHICLHTSLSGVFNQAMVKKVGADDFLAKFKPDD 296

Query: 301 LVQVAQERLR 310
           L Q   +R++
Sbjct: 297 LAQRVVDRIK 306