Pairwise Alignments

Query, 314 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., putative chemotaxis protein from Pseudomonas putida KT2440

 Score =  171 bits (434), Expect = 2e-47
 Identities = 111/285 (38%), Positives = 161/285 (56%), Gaps = 16/285 (5%)

Query: 20  LELLLFSLNSRQIFAINVFKVREVIKVPLLTKMPGSHPHITGVASLRGEPVPVIDLRSAI 79
           L LLLF+L S ++ AIN+ KV E+I  P LTK+P SHPH+ GVA+LRG  + VIDL  AI
Sbjct: 11  LSLLLFTLRSGKLMAINLLKVSEIIPCPPLTKLPESHPHVKGVATLRGHSLSVIDLSRAI 70

Query: 80  GFPPRRVQDTEQNLIITEYNRTIQGFLVGQVRNIINTAWTEIQPPPKSAGRANYLTAFTH 139
           G  P  V      LI+TE +R+ QG  V  V  I++   T+I+PPP ++G  +++T  T 
Sbjct: 71  GEQP-LVDPQGGCLIVTEISRSRQGLHVQAVSRIVHCLSTDIKPPPYASGTRSFITGVTR 129

Query: 140 VKEQDKTHIVEIIDVEKVLAEIVHYDASISKEVLDESLLNHMDGRTILIVDDSSTARNQV 199
           V   D T +V+++D+EKV+  I    A      L+E   + +    IL+VDDS  A  Q 
Sbjct: 130 V---DNT-LVQVLDIEKVIHAIAPPVAEPVHSSLNEEDASLLAAANILVVDDSQVALQQS 185

Query: 200 KDTLSQLGLNIIECH---DGLQALNLLKSWCDEGKDIYSELLMMITDAEMPEMDGYKLTY 256
             TL  LG   IECH       A+N+L     E +    E+ ++++D EM EMDGY  T 
Sbjct: 186 VHTLRNLG---IECHTARSAKDAINVLL----ELQGTAQEINIIVSDIEMSEMDGYAFTR 238

Query: 257 EIRNDPRMKDLFITLNTSLSGSFNEAMVQKVGCNRFISKF-QPDL 300
            +R  P  + L++ L+TSL  + +     + G N  ++KF  P+L
Sbjct: 239 TLRETPDFQHLYVLLHTSLDSAMSSEKATQAGANAILTKFSSPEL 283