Pairwise Alignments

Query, 314 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., chemotaxis protein from Pseudomonas sp. SVBP6

 Score =  170 bits (431), Expect = 3e-47
 Identities = 108/283 (38%), Positives = 159/283 (56%), Gaps = 12/283 (4%)

Query: 20  LELLLFSLNSRQIFAINVFKVREVIKVPLLTKMPGSHPHITGVASLRGEPVPVIDLRSAI 79
           L LLLF+L S ++ AIN+ KV E+I  P LTK+P SHPH+ GVA+LRG  + VIDL  AI
Sbjct: 11  LSLLLFTLRSGKLMAINLLKVSEIIPCPPLTKLPESHPHVKGVATLRGNSLSVIDLSRAI 70

Query: 80  GFPPRRVQDTEQN-LIITEYNRTIQGFLVGQVRNIINTAWTEIQPPPKSAGRANYLTAFT 138
           G   R ++D +   LI+T+ +R+ QG  V  V  I++   T+I+PPP  +G  +++T  T
Sbjct: 71  G--ERPLEDPDGGCLIVTDISRSKQGLHVQAVSKIVHCLSTDIKPPPYGSGSKSFITGVT 128

Query: 139 HVKEQDKTHIVEIIDVEKVLAEIVHYDASISKEVLDESLLNHMDGRTILIVDDSSTARNQ 198
            V   D T +V+++D+EKV+  I      +    L       +    IL+VDDS  A  Q
Sbjct: 129 RV---DNT-LVQVLDIEKVIHGIAPPTHEVVTSELSAEDAAVLAATNILVVDDSQVALQQ 184

Query: 199 VKDTLSQLGLNIIECHDGLQALNLLKSWCDEGKDIYSELLMMITDAEMPEMDGYKLTYEI 258
              TL  LG   IECH    A + + +   E +    E+ ++++D EM EMDGY  T  +
Sbjct: 185 SVHTLRNLG---IECHTARSAKDAINTLL-ELQGTEREINVVVSDIEMSEMDGYAFTRTL 240

Query: 259 RNDPRMKDLFITLNTSLSGSFNEAMVQKVGCNRFISKF-QPDL 300
           R  P  + L++ L+TSL  + N    +  G N  ++KF  PDL
Sbjct: 241 RETPDFQHLYVLLHTSLDSAMNSDKAKDAGANAVLTKFSSPDL 283