Pairwise Alignments

Query, 314 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., Chemotaxis protein CheV from Alteromonas macleodii MIT1002

 Score =  296 bits (758), Expect = 4e-85
 Identities = 159/310 (51%), Positives = 212/310 (68%), Gaps = 7/310 (2%)

Query: 1   MSGVLNTVDQRTNLVGENRLELLLFSLNSRQIFAINVFKVREVIKVPLLTKMPGSHPHIT 60
           MSG+L++V+QRT LVG+NRLELLLF LN RQ F INVFKVREV++ P LT MP  +P + 
Sbjct: 1   MSGILDSVNQRTQLVGQNRLELLLFRLNGRQRFGINVFKVREVLQCPPLTAMPKLNPLVR 60

Query: 61  GVASLRGEPVPVIDLRSAIGFPPRRVQDTEQN-LIITEYNRTIQGFLVGQVRNIINTAWT 119
           GVA +RG+ + VIDL  A     R+++D     ++I EYNR++QGFLVG V  IINT W 
Sbjct: 61  GVAHIRGQTISVIDLSMATR--GRKIEDLSNAFIVIAEYNRSVQGFLVGAVERIINTNWD 118

Query: 120 EIQPPPKSAGRANYLTAFTHVKEQDKTHIVEIIDVEKVLAEIVHYDASISKEVLDESLLN 179
            I PPP+  GRA+YLTA T V+ +    ++EI+DVEK+L EI   +A +S EV +     
Sbjct: 119 AIMPPPQGTGRASYLTAVTEVENE----LIEILDVEKILNEISPLNAEVSSEVAEGLTTE 174

Query: 180 HMDGRTILIVDDSSTARNQVKDTLSQLGLNIIECHDGLQALNLLKSWCDEGKDIYSELLM 239
             + + I I DDS+ ARNQVK  L+ LGL I    +GL+ALN LK   +E  D+ + + +
Sbjct: 175 GQENKIIFIADDSAVARNQVKKALTSLGLEIELAKNGLEALNRLKEIAEEYGDVTNRVGV 234

Query: 240 MITDAEMPEMDGYKLTYEIRNDPRMKDLFITLNTSLSGSFNEAMVQKVGCNRFISKFQPD 299
           +++D EMPEMDGY LT EI+N P ++ L + L+TSLSG FN+AMVQKVG + FI+KF PD
Sbjct: 235 LVSDIEMPEMDGYTLTAEIKNTPELQKLHVVLHTSLSGVFNQAMVQKVGADDFIAKFHPD 294

Query: 300 LLVQVAQERL 309
            L    Q+ L
Sbjct: 295 ELATAVQKWL 304