Pairwise Alignments

Query, 616 a.a., signal peptide peptidase SppA from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 82.8 bits (203), Expect = 2e-20
 Identities = 72/215 (33%), Positives = 100/215 (46%), Gaps = 15/215 (6%)

Query: 322 TDANDIAVVVASGAIMDGSQPRGTVGGDTVAGLLREARNDSNVKAVVLRVDSPGGSAFAS 381
           +DA  + VV  SG I   S    ++   + A  L +A    +  AV L ++SPGGS   S
Sbjct: 30  SDAPMVPVVRLSGPIGMTSPFSRSMSLGSTAQALEKAFGMKDAPAVALLINSPGGSPVQS 89

Query: 382 EVIRNEIEAL-KAAGKPVVVSMSSLAASGGYWISMSADKIVAQPTTLTGSIGIFSVITTF 440
            +I   I AL +   K V   +   AASGGY I+ +AD+I A P ++ GSIG+ +    F
Sbjct: 90  HLIFRRIRALAEEKEKHVFAFVEDAAASGGYMIACAADEIFADPCSIVGSIGVVTAGFGF 149

Query: 441 EKGLNNLGI----YTDG---VGTTPFSGQGLTTGLTQGAKDAIQLGIEHGYQRFISLVAE 493
           ++ +  LGI    YT G   V   PF              + +   ++  +  F  LV  
Sbjct: 150 DRAIEKLGIERRVYTAGERKVTLDPF------RPTQPDDVERLDQLLKELHTVFADLVKS 203

Query: 494 KRGLTLKAVDE-LAQGRVWTAQDAQTLGLVDQLGD 527
           +RG  L   DE L  G  W    A  LGLVD LGD
Sbjct: 204 RRGDALMGDDEALFSGEFWLGTQAVGLGLVDGLGD 238



 Score = 35.0 bits (79), Expect = 4e-06
 Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 3/103 (2%)

Query: 143 KPVFA-VGDFYNQSQYYLASYADKIYLAPDGAVLLKGYSAYSMYYKTLLEKLDVTTHVFR 201
           K VFA V D      Y +A  AD+I+  P   V   G       +   +EKL +   V+ 
Sbjct: 105 KHVFAFVEDAAASGGYMIACAADEIFADPCSIVGSIGVVTAGFGFDRAIEKLGIERRVYT 164

Query: 202 VGTYKSAIEPFVRDDMSDAARESASRWLTQLWSAYVDDVAANR 244
            G  K  ++PF      D   E   + L +L + + D V + R
Sbjct: 165 AGERKVTLDPFRPTQPDDV--ERLDQLLKELHTVFADLVKSRR 205