Pairwise Alignments

Query, 616 a.a., signal peptide peptidase SppA from Vibrio cholerae E7946 ATCC 55056

Subject, 627 a.a., Signal peptide peptidase SppA (protease 4) from Sphingobium sp. HT1-2

 Score =  361 bits (926), Expect = e-104
 Identities = 229/616 (37%), Positives = 339/616 (55%), Gaps = 30/616 (4%)

Query: 12  LKGIWKAITFIRLALTNLIFLLSIGIIYFIYVHADAPLPTMDKSSALVLNLSGPIVEQST 71
           +KG W+ +  I+  L  L  LL  G++Y     +  P   +  S AL+L+L G IVEQ  
Sbjct: 4   VKGAWRILVAIKDGLVLLFLLLFFGLLYAALSFSPKPAKPIG-SGALLLDLDGSIVEQPA 62

Query: 72  HINPMDSFTGSVFGEELPRENVLFDIVETLRHAKNDNNVTGLVLALGDMPETNLTKLRYI 131
            ++     +GS  G++  +E  L DI+  L  A+ D+ V  +VL L D        +  +
Sbjct: 63  EVSATAILSGS--GDQA-KEYRLSDILTALDAARTDDKVKAVVLDLDDFTGGGQVAIARV 119

Query: 132 AKAINEFKASGKPVFAVGDFYNQSQYYLASYADKIYLAPDGAVLLKGYSAYSMYYKTLLE 191
            KA++  +A+ K VFA    Y+   Y LA++A + ++ P G V + G     +YYK L++
Sbjct: 120 GKALDAVRAAKKLVFAFATLYSDDSYQLAAHASEAWVDPMGGVAIAGRGGSGLYYKGLID 179

Query: 192 KLDVTTHVFRVGTYKSAIEPFVRDDMSDAARESASRWLTQLWSAYVDDVAANRQIEIKTL 251
           KL V THV+RVGTYKS +EP++R D S AA+++       LW  + DDV   R  + K  
Sbjct: 180 KLGVNTHVYRVGTYKSFVEPYIRADQSPAAKQANQELAGALWQNWQDDVTRARP-KAKVA 238

Query: 252 TPSMEQFVAQLKEVNGDLAALSKKVGLVDELATRQQVRQTLAETFG--SDGKDS-YNAIG 308
             + +   A      GD+A  +   GLVD+L  +    + +A+  G  SD  D+ Y AI 
Sbjct: 239 AYAADP-AAAASAAGGDMAKAALAAGLVDQLGDQDAFEERVAKVAGDPSDKDDTDYAAID 297

Query: 309 YYEYKTTIKPTTLTDAND--IAVVVASGAIMDGSQPRGTVGGDTVAGLLREARNDSNVKA 366
           Y  Y    KP     AND  I V+  +G I+DG    GT  GDT++ LL +A ++ ++KA
Sbjct: 298 YAAYVKARKP-----ANDGQIGVLTVAGDIVDGEAGPGTAAGDTISDLLLKALDEKDLKA 352

Query: 367 VVLRVDSPGGSAFASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISMSADKIVAQPTT 426
           +V+RVDSPGGS  ASE IR  I   K+ G P+VVSM ++AASGGYW+S  AD + A+P T
Sbjct: 353 LVVRVDSPGGSVQASEKIRRAIMEAKSGGLPIVVSMGNVAASGGYWVSTPADIVFAEPDT 412

Query: 427 LTGSIGIFSVITTFEKGLNNLGIYTDGVGTTPFSGQ-GLTTGLTQGAKDAIQLGIEHGYQ 485
           +TGSIG+F +I +FE  L  +GI TDGV TTP SGQ  +  G T      +Q+G+E  Y+
Sbjct: 413 ITGSIGVFGIIPSFEGTLAKMGITTDGVRTTPLSGQPDIAGGTTPQFDQIMQMGVEDIYR 472

Query: 486 RFISLVAEKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQLGDFDDAVHLAADLAQLD--Q 543
           RF+ LVA+ R  T   +D +AQGRVW    A+ +GL+D+ GD +DA+  AA  A++D  +
Sbjct: 473 RFVGLVAQARHKTPAQIDTIAQGRVWDGGTARQIGLIDRFGDLNDAIAEAARRAKIDPAK 532

Query: 544 YNLYWVEEPLTPAQQFLQDLLGQVRVSLGLDVSTLLPKSLQPLAVEWQQQTSL-----LN 598
              YW+E+      +F+Q +  + +   G       P+ L     + QQ+ +L     + 
Sbjct: 533 AKPYWIEKQPDKFAEFIQSIADREKDDAG------APRDLIGREAKLQQRWALQAVADVR 586

Query: 599 QLNDPKGQYAFCLPCQ 614
            L    G  A CL C+
Sbjct: 587 ALVSGAGVRADCLECR 602