Pairwise Alignments

Query, 616 a.a., signal peptide peptidase SppA from Vibrio cholerae E7946 ATCC 55056

Subject, 616 a.a., signal peptide peptidase SppA from Pectobacterium carotovorum WPP14

 Score =  536 bits (1381), Expect = e-156
 Identities = 290/618 (46%), Positives = 401/618 (64%), Gaps = 11/618 (1%)

Query: 1   MKSLFRFVGLILKGIWKAITFIRLALTN--LIFLLSIGIIYFIYVHADAPLPTMDKSSAL 58
           M++L+R      K  W+ + FIR  + N  LI L+ +G+  +  V      P      AL
Sbjct: 1   MRTLWRIFSGFFKWTWRLLNFIREFILNIFLIALILVGVGIYSQVKTT---PEAATKGAL 57

Query: 59  VLNLSGPIVEQSTHINPMDSFTGSVFGEELPR--ENVLFDIVETLRHAKNDNNVTGLVLA 116
           +++L+G +V+Q T  N +       FG    R  EN LFDIV+++R AK+D+N+TG+VL 
Sbjct: 58  LVDLTGVVVDQPTVNNKLRQLGREFFGASNNRRQENSLFDIVDSIRQAKSDDNITGMVLD 117

Query: 117 LGDMPETNLTKLRYIAKAINEFKASGKPVFAVGDFYNQSQYYLASYADKIYLAPDGAVLL 176
           L D    +   L+YI KA+ EF+ SGKP++AVGD YNQSQYYLAS+A+ + L P G+V L
Sbjct: 118 LSDFTGADQPSLQYIGKALREFRDSGKPIYAVGDSYNQSQYYLASFANTVSLTPQGSVDL 177

Query: 177 KGYSAYSMYYKTLLEKLDVTTHVFRVGTYKSAIEPFVRDDMSDAARESASRWLTQLWSAY 236
            G++  ++Y+K++L+KL VTT++FRVGTYKSA+EP++RDDMS AAR++  RW+  LW  Y
Sbjct: 178 HGFATNNLYFKSMLDKLKVTTNIFRVGTYKSAVEPYLRDDMSPAARDADGRWINALWQQY 237

Query: 237 VDDVAANRQIEIKTLTPSMEQFVAQLKEVNGDLAALSKKVGLVDELATRQQVRQTLAETF 296
           ++ V+ANRQI  + L P     +A L+ V GD A  +    LVDE+A+R    Q+L + F
Sbjct: 238 LNTVSANRQITPQQLFPGATSIIAGLQAVQGDTARYALDNKLVDEVASRSVTEQSLVKAF 297

Query: 297 G-SDGKDSYNAIGYYEYKTTIKPTTLTDANDIAVVVASGAIMDGSQPRGTVGGDTVAGLL 355
           G +  K+++N I  Y+Y   IKP    + N IAVV A+GAI+DG +  G VGGDT A  +
Sbjct: 298 GWNSQKNNFNFISIYDY--AIKPPVQNN-NQIAVVFANGAIIDGPETPGMVGGDTTAAQI 354

Query: 356 REARNDSNVKAVVLRVDSPGGSAFASEVIRNEIEALKAAGKPVVVSMSSLAASGGYWISM 415
           R AR D  VKA+VLRV+SPGGS  ASE+IR+E+ AL+ AGKP+VVSM  +AASGGYWIS 
Sbjct: 355 RAARLDPKVKALVLRVNSPGGSVTASELIRSELMALRLAGKPIVVSMGGMAASGGYWIST 414

Query: 416 SADKIVAQPTTLTGSIGIFSVITTFEKGLNNLGIYTDGVGTTPFSGQGLTTGLTQGAKDA 475
            A+ I++  +TLTGSIGIF VITTFE  L +LG++TDGV T+P +   +T  L       
Sbjct: 415 PANTIISSASTLTGSIGIFGVITTFEDSLESLGVHTDGVATSPLADLSITKSLPPEFSQM 474

Query: 476 IQLGIEHGYQRFISLVAEKRGLTLKAVDELAQGRVWTAQDAQTLGLVDQLGDFDDAVHLA 535
           +QL IE GY+ FI +VA+ R  T + +D++AQG VW   DA+  GLVDQ+GDFDDAV  A
Sbjct: 475 MQLSIERGYKNFIDIVAQARKKTPEQIDQIAQGHVWVGSDAKENGLVDQIGDFDDAVKKA 534

Query: 536 ADLAQLDQYNLYWVEEPLTPAQQFLQDLLGQVRVSLGLDVSTLLPKSLQPLAVEWQQQTS 595
           A+LA+L QY L W  E        L  +   V   L + V ++LP  +  LA   + Q S
Sbjct: 535 AELAKLGQYQLNWYAEQPGLLDTMLNQVNASVYALLPVAVQSMLPAPVAQLAEVVRSQPS 594

Query: 596 LLNQLNDPKGQYAFCLPC 613
           ++N LNDP+ +YAFCL C
Sbjct: 595 IMNNLNDPQNRYAFCLTC 612